RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 POTEDQ86YR6 584 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 CSGALNACT2Q8N6G5 542 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 RIC8AQ9NPQ8 531 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 LRWD1Q9UFC0 647 aa24.94■■□□□ 1.58
NKX2-1-201ENST00000354822 PPP2R3AQ06190 1150 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 TSR1Q2NL82 804 aaKnown RBP24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 OR8K1Q8NGG5 319 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 TEKT1Q969V4 418 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 COA7Q96BR5 231 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 TMEM260Q9NX78 707 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 MYO1AQ9UBC5 1043 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 G3V3G9 751 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 BMS1Q14692 1282 aaKnown RBP24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 DCAF8Q5TAQ9 597 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 CCDC17Q96LX7 622 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 NUP58Q9BVL2 599 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 LRRC27Q9C0I9 530 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 JMJD4Q9H9V9 463 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 GPCPD1Q9NPB8 672 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 FAM53CQ9NYF3 392 aa24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 LUC7L2Q9Y383 392 aaKnown RBP24.93■■□□□ 1.58
NKX2-1-201ENST00000354822 EP400Q96L91 3159 aa24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 RXRBP28702 533 aa24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 ERVK-24P63145 666 aa24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 PPP4R3AQ6IN85 833 aa24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 DUSP9Q99956 384 aaKnown RBP24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 CAPN11Q9UMQ6 739 aa24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 TNS1Q9HBL0 1735 aaKnown RBP24.92■■□□□ 1.58
NKX2-1-201ENST00000354822 PVALEFA0A1B0GWK0 134 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 SHMT1P34896 483 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 CDC42EP5Q6NZY7 148 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 ADGRF4Q8IZF3 695 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 KRT222Q8N1A0 295 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 GPR161Q8N6U8 529 aaKnown RBP24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 RETREG2Q8NC44 543 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 EHD4Q9H223 541 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 RGPD3A6NKT7 1758 aaPredicted RBP24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 RGPD4Q7Z3J3 1758 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 MRPL12P52815 198 aaKnown RBP24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 TUBB4BP68371 445 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 CDK5RAP3Q96JB5 506 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 TUBGCP2Q9BSJ2 902 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 MRIQ9BWK5 157 aa24.91■■□□□ 1.58
NKX2-1-201ENST00000354822 RNF225M0QZC1 329 aaPredicted RBP24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 CLCN6P51797 869 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 EIF6P56537 245 aaKnown RBP24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 STK4Q13043 487 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 DNAJC7Q99615 494 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 GLT8D2Q9H1C3 349 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 CUL5Q93034 780 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 MYH8P13535 1937 aa24.9■■□□□ 1.58
NKX2-1-201ENST00000354822 TTC26A0AVF1 554 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 PES1O00541 588 aaKnown RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 GRB10Q13322 594 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 DOK7Q18PE1 504 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 ZNF569Q5MCW4 686 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 MSL1Q68DK7 614 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 ANKRD40Q6AI12 368 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 APOBEC3HQ6NTF7 200 aaKnown RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 RSRC2Q7L4I2 434 aaKnown RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 PODNQ7Z5L7 613 aa24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 NAP1L4Q99733 375 aaKnown RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 IRX2Q9BZI1 471 aaPredicted RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 EPN1Q9Y6I3 576 aaPredicted RBP24.89■■□□□ 1.58
NKX2-1-201ENST00000354822 ZBTB5O15062 677 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 PRKCSHP14314 528 aaPredicted RBP24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 ZSCAN20P17040 1043 aaPredicted RBP24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 CLK2P49760 499 aaKnown RBP24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 KRT79Q5XKE5 535 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 TMCO3Q6UWJ1 677 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 UNC13DQ70J99 1090 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 LARP4BQ92615 738 aaKnown RBP24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 RABGGTAQ92696 567 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 IQCDQ96DY2 449 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 CTAGE9A4FU28 777 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 SCNN1DP51172 638 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 ACRBPQ8NEB7 543 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 GOLGA1Q92805 767 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 MTMR8Q96EF0 704 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 BLOC1S4Q9NUP1 217 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 ZNF446Q9NWS9 450 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 CDC23Q9UJX2 597 aa24.88■■□□□ 1.57
NKX2-1-201ENST00000354822 GCFC2P16383 781 aaKnown RBP24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 CEP112Q8N8E3 955 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 ZNF622Q969S3 477 aaKnown RBP eCLIP24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 DHX36Q9H2U1 1008 aaKnown RBP24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 SLC37A4O43826 429 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 EDIL3O43854 480 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 TDP2O95551 362 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 TBC1D8BQ0IIM8 1120 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 CENPPQ6IPU0 288 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 C2CD5Q86YS7 1000 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 ZDHHC15Q96MV8 337 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 PNMA5Q96PV4 448 aa24.87■■□□□ 1.57
NKX2-1-201ENST00000354822 MPHOSPH10O00566 681 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 ATP8B1O43520 1251 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 NDUFA10O95299 355 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 FGFR1OPO95684 399 aaKnown RBP24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 FCER1AP12319 257 aa24.86■■□□□ 1.57
NKX2-1-201ENST00000354822 CNOT6LQ96LI5 555 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms