RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 BLZF1Q9H2G9 400 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 USP17L5A8MUK1 530 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 DYMQ7RTS9 669 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
SMAD9-201ENST00000350148 TGFB2P61812 414 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 FAM26FQ5R3K3 315 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 ANO3Q9BYT9 981 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 LARSQ9P2J5 1176 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 DISP2A7MBM2 1401 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 RIOK3O14730 519 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 SRGNP10124 158 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 PSMD1Q99460 953 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 AGXT2Q9BYV1 514 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 AHDC1Q5TGY3 1603 aaPredicted RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 KCNJ18B7U540 433 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 EVCP57679 992 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 KCNJ12Q14500 433 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 MTMR4Q9NYA4 1195 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 PHRF1Q9P1Y6 1649 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 POLRMTO00411 1230 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 LRCH2Q5VUJ6 765 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 RIOK1Q9BRS2 568 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.47□□□□□ -0.25
SMAD9-201ENST00000350148 DNAI1Q9UI46 699 aa13.47□□□□□ -0.25
SMAD9-201ENST00000350148 CTAGE15A4D2H0 777 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 SLU7O95391 586 aaKnown RBP13.46□□□□□ -0.25
SMAD9-201ENST00000350148 CTAGE8P0CG41 777 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 CCND2P30279 289 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 COPB2P35606 906 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 ENOX2Q16206 610 aaKnown RBP13.46□□□□□ -0.25
SMAD9-201ENST00000350148 WDR44Q5JSH3 913 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 CTAGE6Q86UF2 777 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 CTAGE4Q8IX94 777 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 FAM151AQ8WW52 585 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 ATP6V0A1Q93050 837 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 AIFM3Q96NN9 605 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 XPO4Q9C0E2 1151 aaKnown RBP13.46□□□□□ -0.25
SMAD9-201ENST00000350148 FBXO40Q9UH90 709 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 GOLGA6L10A0A0M3HER8 536 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 GCNT3O95395 438 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 TERF1P54274 439 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 ALCAMQ13740 583 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 FAM160B1Q5W0V3 765 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 COA7Q96BR5 231 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 FAM20AQ96MK3 541 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 FNBP1Q96RU3 617 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 JPH2Q9BR39 696 aaPredicted RBP13.46□□□□□ -0.25
SMAD9-201ENST00000350148 TCRBV5S4A2TA0A5A2 114 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 CCDC169A6NNP5 214 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 NEK9Q8TD19 979 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 DDX12PQ92771 950 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 RWDD2AQ9UIY3 292 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.25
SMAD9-201ENST00000350148 EEF2P13639 858 aaKnown RBP13.46□□□□□ -0.26
SMAD9-201ENST00000350148 CRACR2AQ9BSW2 395 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 SLF1Q9BQI6 1058 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 IL25Q9H293 177 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.26
SMAD9-201ENST00000350148 CHRNA5P30532 468 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 USP11P51784 963 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 DCAF17Q5H9S7 520 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 TRMT1LQ7Z2T5 733 aaKnown RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ANKRD35Q8N283 1001 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 RETREG2Q8NC44 543 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 JADE2Q9NQC1 790 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF277Q9NRM2 450 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 SHTN1A0MZ66 631 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ZBTB22O15209 634 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 DDIT3P35638 169 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 SLC16A2P36021 539 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ASIC2Q16515 512 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 GADL1Q6ZQY3 521 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 SMCR8Q8TEV9 937 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 EHD4Q9H223 541 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 TAB2Q9NYJ8 693 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 MAN1B1Q9UKM7 699 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF577Q9BSK1 485 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 RASA1P20936 1047 aa13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ELOA2Q8IYF1 753 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 FAM163AQ96GL9 167 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-201ENST00000350148 ZNF500O60304 480 aaPredicted RBP13.44□□□□□ -0.26
SMAD9-201ENST00000350148 FMR1NBQ8N0W7 255 aaPredicted RBP13.44□□□□□ -0.26
SMAD9-201ENST00000350148 KCTD17Q8N5Z5 321 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 RASGRP4Q8TDF6 673 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
SMAD9-201ENST00000350148 CEP83Q9Y592 693 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms