RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PRPHP41219 470 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 KRT83P78385 493 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 ZBED6P86452 979 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 PSMB7Q99436 277 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 FRMPD2Q68DX3 1309 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 MYMKA6NI61 221 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 BTDP43251 543 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 TNNT3P45378 269 aaPredicted RBP20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 NEK8Q86SG6 692 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 CCDC155Q8N6L0 562 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 WDR66Q8TBY9 1149 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 COA7Q96BR5 231 aa20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 ZNHIT6Q9NWK9 470 aaKnown RBP20.19■□□□□ 0.82
PTP4A3-202ENST00000349124 KRT86O43790 486 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 EDIL3O43854 480 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 BAG3O95817 575 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 LRRC41Q15345 812 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 WDR93Q6P2C0 686 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 CLEC10AQ8IUN9 316 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 MLXIPQ9HAP2 919 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 SMARCAL1Q9NZC9 954 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 CYLC1P35663 651 aaPredicted RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 EIF6P56537 245 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 C2orf54Q08AI8 447 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 GALNT17Q6IS24 598 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 TMED8Q6PL24 325 aaPredicted RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 RTFDC1Q9BY42 306 aaPredicted RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 BLOC1S4Q9NUP1 217 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 EIF3JO75822 258 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 MYL1P05976 194 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 IDEP14735 1019 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 GRB10Q13322 594 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 EZH2Q15910 746 aaKnown RBP20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 C2CD5Q86YS7 1000 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 ARHGAP20Q9P2F6 1191 aa20.18■□□□□ 0.82
PTP4A3-202ENST00000349124 KIAA1551Q9HCM1 1747 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 POTEMA6NI47 508 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 EIF3CLB5ME19 914 aaKnown RBP20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 LAD1O00515 517 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 SLC37A4O43826 429 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 KRT25Q7Z3Z0 450 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 CCDC42Q96M95 316 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 EIF3CQ99613 913 aaKnown RBP20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 CAPN6Q9Y6Q1 641 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 LAMB2P55268 1798 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 TULP2O00295 520 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 TDP2O95551 362 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 PPP4CP60510 307 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 KCNK18Q7Z418 384 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 CAGE1Q8TC20 777 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 HDAC7Q8WUI4 952 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 MMRN2Q9H8L6 949 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 C6orf50Q9HD87 102 aa20.17■□□□□ 0.82
PTP4A3-202ENST00000349124 SYF2O95926 243 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 CXCR5P32302 372 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 TUBB4BP68371 445 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 CCDC96Q2M329 555 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 NOC3LQ8WTT2 800 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 COG1Q8WTW3 980 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 RRP36Q96EU6 259 aaKnown RBP20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 AK8Q96MA6 479 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 PNMA5Q96PV4 448 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 SPZ1Q9BXG8 430 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 EHD2Q9NZN4 543 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 BICDL2A1A5D9 508 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 SOGA3Q5TF21 947 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 TEX11Q8IYF3 940 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 GBP3Q9H0R5 595 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 PSD3Q9NYI0 1048 aa20.16■□□□□ 0.82
PTP4A3-202ENST00000349124 RREB1Q92766 1687 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 COL22A1Q8NFW1 1626 aaPredicted RBP20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 CNTNAP4Q9C0A0 1308 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 IPO7O95373 1038 aaKnown RBP20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 MOCS3O95396 460 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 ACTN2P35609 894 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 ZSCAN29Q8IWY8 852 aaPredicted RBP20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 NUP58Q9BVL2 599 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 PLEKHA4Q9H4M7 779 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 MATR3P43243 847 aaKnown RBP eCLIP20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 KIF5AQ12840 1032 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 HSP90B2PQ58FF3 399 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 ERGIC2Q96RQ1 377 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 FAM204AQ9H8W3 233 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 SALL4Q9UJQ4 1053 aa20.15■□□□□ 0.82
PTP4A3-202ENST00000349124 GNA11P29992 359 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 EIF4A3P38919 411 aaKnown RBP20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 SKIDA1Q1XH10 827 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 MUM1L1Q5H9M0 696 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 CENPPQ6IPU0 288 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 BARGINQ6ZT62 677 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 SV2BQ7L1I2 683 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 CCDC170Q8IYT3 715 aa20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 REXO1Q8N1G1 1221 aaKnown RBP20.14■□□□□ 0.82
PTP4A3-202ENST00000349124 NEDD1Q8NHV4 660 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms