RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 LDHBP07195 334 aaKnown RBP13.21□□□□□ -0.29
APP-201ENST00000346798 OR52Z1P0C646 297 aa13.21□□□□□ -0.29
APP-201ENST00000346798 COG1Q8WTW3 980 aa13.21□□□□□ -0.29
APP-201ENST00000346798 IFIH1Q9BYX4 1025 aaKnown RBP13.21□□□□□ -0.29
APP-201ENST00000346798 KANSL2Q9H9L4 492 aa13.21□□□□□ -0.29
APP-201ENST00000346798 CCNE1P24864 410 aa13.21□□□□□ -0.3
APP-201ENST00000346798 RNASE9P60153 205 aaKnown RBP13.21□□□□□ -0.3
APP-201ENST00000346798 C12orf60Q5U649 245 aa13.21□□□□□ -0.3
APP-201ENST00000346798 RRAGAQ7L523 313 aa13.21□□□□□ -0.3
APP-201ENST00000346798 AMOTL1Q8IY63 956 aa13.21□□□□□ -0.3
APP-201ENST00000346798 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.3
APP-201ENST00000346798 RASSF4Q9H2L5 321 aa13.21□□□□□ -0.3
APP-201ENST00000346798 HPCAL4Q9UM19 191 aa13.21□□□□□ -0.3
APP-201ENST00000346798 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
APP-201ENST00000346798 ARAP2Q8WZ64 1704 aa13.2□□□□□ -0.3
APP-201ENST00000346798 A0A1W2PQC6 194 aa13.2□□□□□ -0.3
APP-201ENST00000346798 ZNF263O14978 683 aa13.2□□□□□ -0.3
APP-201ENST00000346798 BUB1O43683 1085 aa13.2□□□□□ -0.3
APP-201ENST00000346798 ZBED6P86452 979 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SF3B3Q15393 1217 aaKnown RBP13.2□□□□□ -0.3
APP-201ENST00000346798 KCTD19Q17RG1 926 aaPredicted RBP13.2□□□□□ -0.3
APP-201ENST00000346798 MAP9Q49MG5 647 aa13.2□□□□□ -0.3
APP-201ENST00000346798 NFRKBQ6P4R8 1299 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SND1Q7KZF4 910 aaKnown RBP eCLIP13.2□□□□□ -0.34e-8■■■□□ 18.6
APP-201ENST00000346798 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
APP-201ENST00000346798 LINC00116Q8NCU8 138 aa13.2□□□□□ -0.3
APP-201ENST00000346798 CDK5RAP3Q96JB5 506 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SELENOOQ9BVL4 669 aa13.2□□□□□ -0.3
APP-201ENST00000346798 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SYF2O95926 243 aaKnown RBP13.2□□□□□ -0.3
APP-201ENST00000346798 ARID5AQ03989 594 aa13.2□□□□□ -0.3
APP-201ENST00000346798 KCNB1Q14721 858 aa13.2□□□□□ -0.3
APP-201ENST00000346798 GRM4Q14833 912 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SOGA3Q5TF21 947 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SRLQ86TD4 932 aa13.2□□□□□ -0.3
APP-201ENST00000346798 TBCKQ8TEA7 893 aa13.2□□□□□ -0.3
APP-201ENST00000346798 SETDB2Q96T68 719 aa13.2□□□□□ -0.3
APP-201ENST00000346798 BARHL2Q9NY43 387 aa13.2□□□□□ -0.3
APP-201ENST00000346798 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
APP-201ENST00000346798 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
APP-201ENST00000346798 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
APP-201ENST00000346798 PLCH1Q4KWH8 1693 aa13.2□□□□□ -0.3
APP-201ENST00000346798 EIF4A3P38919 411 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 TUBB4BP68371 445 aa13.19□□□□□ -0.3
APP-201ENST00000346798 CKAP4Q07065 602 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 NONOQ15233 471 aaKnown RBP eCLIP13.19□□□□□ -0.3
APP-201ENST00000346798 TDRD12Q587J7 1177 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 WDR93Q6P2C0 686 aa13.19□□□□□ -0.3
APP-201ENST00000346798 PTF1AQ7RTS3 328 aa13.19□□□□□ -0.3
APP-201ENST00000346798 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
APP-201ENST00000346798 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 DHTKD1Q96HY7 919 aaPredicted RBP13.19□□□□□ -0.3
APP-201ENST00000346798 PIGSQ96S52 555 aa13.19□□□□□ -0.3
APP-201ENST00000346798 FAM170AA1A519 330 aa13.19□□□□□ -0.3
APP-201ENST00000346798 BICDL2A1A5D9 508 aa13.19□□□□□ -0.3
APP-201ENST00000346798 POTEMA6NI47 508 aa13.19□□□□□ -0.3
APP-201ENST00000346798 RAD21O60216 631 aa13.19□□□□□ -0.3
APP-201ENST00000346798 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
APP-201ENST00000346798 LRRC31Q6UY01 552 aa13.19□□□□□ -0.3
APP-201ENST00000346798 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
APP-201ENST00000346798 KIAA0895Q8NCT3 520 aa13.19□□□□□ -0.3
APP-201ENST00000346798 EHBP1Q8NDI1 1231 aa13.19□□□□□ -0.3
APP-201ENST00000346798 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
APP-201ENST00000346798 LRRC1Q9BTT6 524 aa13.19□□□□□ -0.3
APP-201ENST00000346798 CCSER1Q9C0I3 900 aa13.19□□□□□ -0.3
APP-201ENST00000346798 SEMA6BQ9H3T3 888 aa13.19□□□□□ -0.3
APP-201ENST00000346798 DMGDHQ9UI17 866 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 PAPD7Q5XG87 772 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
APP-201ENST00000346798 SEC63Q9UGP8 760 aaKnown RBP13.19□□□□□ -0.3
APP-201ENST00000346798 GNAQP50148 359 aa13.18□□□□□ -0.3
APP-201ENST00000346798 PTPROQ16827 1216 aa13.18□□□□□ -0.3
APP-201ENST00000346798 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
APP-201ENST00000346798 CLEC10AQ8IUN9 316 aa13.18□□□□□ -0.3
APP-201ENST00000346798 COA7Q96BR5 231 aa13.18□□□□□ -0.3
APP-201ENST00000346798 EHD4Q9H223 541 aa13.18□□□□□ -0.3
APP-201ENST00000346798 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
APP-201ENST00000346798 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
APP-201ENST00000346798 FAM182BQ5T319 152 aa13.18□□□□□ -0.3
APP-201ENST00000346798 CCDC70Q6NSX1 233 aa13.18□□□□□ -0.3
APP-201ENST00000346798 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
APP-201ENST00000346798 ARHGAP20Q9P2F6 1191 aa13.18□□□□□ -0.3
APP-201ENST00000346798 PCDHA13Q9Y5I0 950 aa13.18□□□□□ -0.3
APP-201ENST00000346798 DISP2A7MBM2 1401 aa13.18□□□□□ -0.3
APP-201ENST00000346798 GOLGA6BA6NDN3 693 aa13.18□□□□□ -0.3
APP-201ENST00000346798 EIF3CLB5ME19 914 aaKnown RBP13.18□□□□□ -0.3
APP-201ENST00000346798 MARCH6O60337 910 aa13.18□□□□□ -0.3
APP-201ENST00000346798 TACC1O75410 805 aa13.18□□□□□ -0.3
APP-201ENST00000346798 IVLP07476 585 aa13.18□□□□□ -0.3
APP-201ENST00000346798 KIF11P52732 1056 aa13.18□□□□□ -0.3
APP-201ENST00000346798 VAV2P52735 878 aa13.18□□□□□ -0.3
APP-201ENST00000346798 RASSF7Q02833 373 aa13.18□□□□□ -0.3
APP-201ENST00000346798 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
APP-201ENST00000346798 NEK8Q86SG6 692 aa13.18□□□□□ -0.3
APP-201ENST00000346798 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
APP-201ENST00000346798 EYA3Q99504 573 aa13.18□□□□□ -0.3
APP-201ENST00000346798 EIF3CQ99613 913 aaKnown RBP13.18□□□□□ -0.3
APP-201ENST00000346798 NUP58Q9BVL2 599 aa13.18□□□□□ -0.3
APP-201ENST00000346798 TTYH3Q9C0H2 523 aa13.18□□□□□ -0.3
APP-201ENST00000346798 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms