RNA–Protein interactions for RNA: ENST00000346606.10

CSHL1-203, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 659 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-203ENST00000346606 DUSP28Q4G0W2 176 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 KCTD1Q719H9 257 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 IFNL3Q8IZI9 196 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 LRRCC1Q9C099 1032 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 ZNF287Q9HBT7 754 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 VTA1Q9NP79 307 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 PRR12Q9ULL5 1215 aa17.28■□□□□ 0.36
CSHL1-203ENST00000346606 ISY1Q9ULR0 285 aaKnown RBP17.28■□□□□ 0.36
CSHL1-203ENST00000346606 PRRC2BQ5JSZ5 2229 aaKnown RBP17.28■□□□□ 0.36
CSHL1-203ENST00000346606 TCF20Q9UGU0 1960 aaKnown RBP17.28■□□□□ 0.36
CSHL1-203ENST00000346606 GBF1Q92538 1859 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 PATL2C9JE40 543 aaKnown RBP17.27■□□□□ 0.36
CSHL1-203ENST00000346606 APPP05067 770 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 PFKMP08237 780 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 SEC62Q99442 399 aaKnown RBP17.27■□□□□ 0.36
CSHL1-203ENST00000346606 C11orf16Q9NQ32 467 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 IL17RBQ9NRM6 502 aa17.27■□□□□ 0.36
CSHL1-203ENST00000346606 GTPBP6O43824 516 aaPredicted RBP17.26■□□□□ 0.35
CSHL1-203ENST00000346606 LPXNO60711 386 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 SUPT20HL2P0C7V6 817 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 GNAT2P19087 354 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 IKQ13123 557 aaPredicted RBP17.26■□□□□ 0.35
CSHL1-203ENST00000346606 RCSD1Q6JBY9 416 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 NSMFQ6X4W1 530 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 INCENPQ9NQS7 918 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 COG5Q9UP83 839 aa17.26■□□□□ 0.35
CSHL1-203ENST00000346606 LRRC37A2A6NM11 1700 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 RBM47A0AV96 593 aaKnown RBP17.25■□□□□ 0.35
CSHL1-203ENST00000346606 RBAK-RBAKDNI3L0D1 243 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 NMT2O60551 498 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 MYL3P08590 195 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 IQCF3P0C7M6 154 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 BAATQ14032 418 aaPredicted RBP17.25■□□□□ 0.35
CSHL1-203ENST00000346606 NBPF20Q3BBV1 942 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 PHOSPHO2Q8TCD6 241 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 SLC9A7Q96T83 725 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 WDR11Q9BZH6 1224 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 ARIH1Q9Y4X5 557 aaPredicted RBP17.25■□□□□ 0.35
CSHL1-203ENST00000346606 PCDHB15Q9Y5E8 787 aa17.25■□□□□ 0.35
CSHL1-203ENST00000346606 PDE4BQ07343 736 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 PPARAQ07869 468 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 GRB10Q13322 594 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 MTG1Q9BT17 334 aaPredicted RBP17.24■□□□□ 0.35
CSHL1-203ENST00000346606 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 POLR3EQ9NVU0 708 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 CCPG1Q9ULG6 757 aa17.24■□□□□ 0.35
CSHL1-203ENST00000346606 NFIBO00712 420 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 FOXP2O15409 715 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 ICAM1P05362 532 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 ZFYP08048 801 aaPredicted RBP17.23■□□□□ 0.35
CSHL1-203ENST00000346606 ACTN1P12814 892 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 ALDH5A1P51649 535 aaPredicted RBP17.23■□□□□ 0.35
CSHL1-203ENST00000346606 GPNMBQ14956 572 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 TMEM31Q5JXX7 168 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 HLA-CQ95604 372 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 DCTPP1Q9H773 170 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 STX8Q9UNK0 236 aa17.23■□□□□ 0.35
CSHL1-203ENST00000346606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
CSHL1-203ENST00000346606 LCHNA4D1U4 455 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 RFC2P35250 354 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 SLC16A2P36021 539 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 NOVP48745 357 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 CPT1AP50416 773 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 FAM47CQ5HY64 1035 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
CSHL1-203ENST00000346606 OR6J1Q8NGC5 347 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 COPS5Q92905 334 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 RANBP17Q9H2T7 1088 aaKnown RBP17.22■□□□□ 0.35
CSHL1-203ENST00000346606 MTMR7Q9Y216 660 aa17.22■□□□□ 0.35
CSHL1-203ENST00000346606 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 PITPNM1O00562 1244 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 NFRKBQ6P4R8 1299 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 SLC30A10Q6XR72 485 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 CLEC4DQ8WXI8 215 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 CTAGE1Q96RT6 745 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 NACAP1Q9BZK3 213 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 FTOQ9C0B1 505 aaKnown RBP eCLIP17.21■□□□□ 0.35
CSHL1-203ENST00000346606 HCN4Q9Y3Q4 1203 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 MYH7P12883 1935 aa17.21■□□□□ 0.35
CSHL1-203ENST00000346606 A6NJR5 290 aa17.2■□□□□ 0.34
CSHL1-203ENST00000346606 GPR37L1O60883 481 aa17.2■□□□□ 0.34
CSHL1-203ENST00000346606 CTDSPL2Q05D32 466 aa17.2■□□□□ 0.34
CSHL1-203ENST00000346606 RETREG2Q8NC44 543 aa17.2■□□□□ 0.34
CSHL1-203ENST00000346606 NAPBQ9H115 298 aa17.2■□□□□ 0.34
CSHL1-203ENST00000346606 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
CSHL1-203ENST00000346606 ADD3Q9UEY8 706 aaKnown RBP17.2■□□□□ 0.34
CSHL1-203ENST00000346606 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
CSHL1-203ENST00000346606 PTPDC1A2A3K4 754 aa17.19■□□□□ 0.34
CSHL1-203ENST00000346606 TSPY2A6NKD2 308 aa17.19■□□□□ 0.34
CSHL1-203ENST00000346606 KIF28PB7ZC32 967 aa17.19■□□□□ 0.34
CSHL1-203ENST00000346606 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
CSHL1-203ENST00000346606 EDNRBP24530 442 aa17.19■□□□□ 0.34
CSHL1-203ENST00000346606 TCTN1Q2MV58 587 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms