RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 PFKFB2O60825 505 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 PRMT2P55345 433 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 EVCP57679 992 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 IRF5Q13568 498 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 NTRK3Q16288 839 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 UBE2SQ16763 222 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 ZNF792Q3KQV3 632 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 TYW1BQ6NUM6 668 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 USP17L6PQ6QN14 398 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 FGD4Q96M96 766 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 UNC93B1Q9H1C4 597 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 COL20A1Q9P218 1284 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 SOWAHBA6NEL2 793 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 HMGCRP04035 888 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 EIF2AK2P19525 551 aaKnown RBP15.24■□□□□ 0.03
TUBD1-202ENST00000340993 CCND3P30281 292 aaPredicted RBP15.24■□□□□ 0.03
TUBD1-202ENST00000340993 RCAN1P53805 252 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 SOX10P56693 466 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 SSRP1Q08945 709 aaKnown RBP15.24■□□□□ 0.03
TUBD1-202ENST00000340993 ST3GAL1Q11201 340 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 ABRAQ8N0Z2 381 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 SLC5A4Q9NY91 659 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 VPS54Q9P1Q0 977 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 LIMCH1Q9UPQ0 1083 aa15.24■□□□□ 0.03
TUBD1-202ENST00000340993 PFASO15067 1338 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 NID2Q14112 1375 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-202ENST00000340993 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-202ENST00000340993 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 LENG1Q96BZ8 264 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-202ENST00000340993 PGBD1Q96JS3 809 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 TAAR1Q96RJ0 339 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 ALDH8A1Q9H2A2 487 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-202ENST00000340993 GJB4Q9NTQ9 266 aa15.23■□□□□ 0.03
TUBD1-202ENST00000340993 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
TUBD1-202ENST00000340993 DNAJC25-GNG10A0A024R161 153 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 STXBP3O00186 592 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 CTDNEP1O95476 244 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 SCG2P13521 617 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 IFNAR1P17181 557 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 PTGS1P23219 599 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 PKN1Q16512 942 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 MFSD14CQ5VZR4 134 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 CPLX2Q6PUV4 134 aaKnown RBP15.22■□□□□ 0.03
TUBD1-202ENST00000340993 TRIM22Q8IYM9 498 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 FAM133AQ8N9E0 248 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 SYTL5Q8TDW5 730 aaPredicted RBP15.22■□□□□ 0.03
TUBD1-202ENST00000340993 ZNF333Q96JL9 665 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 RNF208Q9H0X6 261 aa15.22■□□□□ 0.03
TUBD1-202ENST00000340993 ADAMTS3O15072 1205 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 XRCC5P13010 732 aaKnown RBP15.21■□□□□ 0.03
TUBD1-202ENST00000340993 CCL5P13501 91 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 PFKFB3Q16875 520 aaPredicted RBP15.21■□□□□ 0.03
TUBD1-202ENST00000340993 ARMCX2Q7L311 632 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 FBXO16Q8IX29 292 aaPredicted RBP15.21■□□□□ 0.03
TUBD1-202ENST00000340993 TRPV1Q8NER1 839 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 PXYLP1Q8TE99 480 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 TINF2Q9BSI4 451 aa15.21■□□□□ 0.03
TUBD1-202ENST00000340993 GCOM1H8Y6P7 765 aaPredicted RBP15.21■□□□□ 0.02
TUBD1-202ENST00000340993 PRPF3O43395 683 aaKnown RBP15.21■□□□□ 0.02
TUBD1-202ENST00000340993 HOXC6P09630 235 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 POLR2MP0CAP2 368 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 SMARCA1P28370 1054 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 ALDH5A1P51649 535 aaPredicted RBP15.21■□□□□ 0.02
TUBD1-202ENST00000340993 MCF2L2Q86YR7 1114 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 SMARCC2Q8TAQ2 1214 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 SHISA4Q96DD7 197 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 TMEM260Q9NX78 707 aa15.21■□□□□ 0.02
TUBD1-202ENST00000340993 MYCLP12524 364 aaPredicted RBP15.2■□□□□ 0.02
TUBD1-202ENST00000340993 PPP2R5BQ15173 497 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 RASGRP4Q8TDF6 673 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 RMDN3Q96TC7 470 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 RNF26Q9BY78 433 aaPredicted RBP15.2■□□□□ 0.02
TUBD1-202ENST00000340993 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.2■□□□□ 0.02
TUBD1-202ENST00000340993 ORC3Q9UBD5 711 aaPredicted RBP15.2■□□□□ 0.02
TUBD1-202ENST00000340993 PNMA2Q9UL42 364 aa15.2■□□□□ 0.02
TUBD1-202ENST00000340993 POTEFA5A3E0 1075 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 SMCO2A6NFE2 343 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 SORBS3O60504 671 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 NSUN7Q8NE18 718 aaKnown RBP15.19■□□□□ 0.02
TUBD1-202ENST00000340993 IL31RAQ8NI17 732 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 CUL5Q93034 780 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 ARMC5Q96C12 935 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 DEFB118Q96PH6 123 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 KCNJ14Q9UNX9 436 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 LRRC37A2A6NM11 1700 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 CDKL5O76039 1030 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 SNAI1O95863 264 aaPredicted RBP15.19■□□□□ 0.02
TUBD1-202ENST00000340993 ADCY7P51828 1080 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 JAKMIP3Q5VZ66 844 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 OLFML2BQ68BL8 750 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 TMX3Q96JJ7 454 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.19■□□□□ 0.02
TUBD1-202ENST00000340993 PDGFCQ9NRA1 345 aa15.19■□□□□ 0.02
TUBD1-202ENST00000340993 KIAA1217Q5T5P2 1943 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms