RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 ACTN1P12814 892 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 DUSP28Q4G0W2 176 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 RPAP2Q8IXW5 612 aaPredicted RBP19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 MORC4Q8TE76 937 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 GDPD5Q8WTR4 605 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 OSBP2Q969R2 916 aa19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 ISY1Q9ULR0 285 aaKnown RBP19.52■□□□□ 0.72
NECTIN1-202ENST00000340882 SIP14410 1827 aa19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 STAT2P52630 851 aa19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 NBPF20Q3BBV1 942 aa19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 ZNF444Q8N0Y2 327 aaPredicted RBP19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 FTOQ9C0B1 505 aaKnown RBP eCLIP19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 VTA1Q9NP79 307 aa19.51■□□□□ 0.71
NECTIN1-202ENST00000340882 FDX1P10109 184 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 GPNMBQ14956 572 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 TKFCQ3LXA3 575 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 FAM47CQ5HY64 1035 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 STAG1Q8WVM7 1258 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 POLR3EQ9NVU0 708 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 SYNPO2Q9UMS6 1093 aa19.5■□□□□ 0.71
NECTIN1-202ENST00000340882 MCCP23508 829 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 RFC2P35250 354 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 ZSCAN25Q6NSZ9 544 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 GIMAP6Q6P9H5 292 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 NSMFQ6X4W1 530 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 KCTD1Q719H9 257 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 NEDD1Q8NHV4 660 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 MTG1Q9BT17 334 aaPredicted RBP19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 WDR11Q9BZH6 1224 aa19.49■□□□□ 0.71
NECTIN1-202ENST00000340882 PLIN4Q96Q06 1357 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 KIF28PB7ZC32 967 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 RAB11FIP3O75154 756 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 IKQ13123 557 aaPredicted RBP19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 TCTN1Q2MV58 587 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 FAM160B2Q86V87 743 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 FAM178BQ8IXR5 827 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 CHURC1Q8WUH1 139 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 GMCL1Q96IK5 515 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 PRR12Q9ULL5 1215 aa19.48■□□□□ 0.71
NECTIN1-202ENST00000340882 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 RBM47A0AV96 593 aaKnown RBP19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 PRR33A8MZF0 331 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 M0R2C6 588 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 PITPNM1O00562 1244 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 SLC1A4P43007 532 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 DEFB103AP81534 67 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 BAATQ14032 418 aaPredicted RBP19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 OR6J1Q8NGC5 347 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 COPS5Q92905 334 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 CTAGE1Q96RT6 745 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 UBE2ZQ9H832 354 aaPredicted RBP19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 SUGCTQ9HAC7 445 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 MTUS1Q9ULD2 1270 aa19.47■□□□□ 0.71
NECTIN1-202ENST00000340882 GPAA1O43292 621 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 SMARCA5O60264 1052 aaPredicted RBP19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 IL9P15248 144 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 TDO2P48775 406 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 MRE11P49959 708 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 CPT1AP50416 773 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 ALDH5A1P51649 535 aaPredicted RBP19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 WDR5P61964 334 aaKnown RBP19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 TFAP4Q01664 338 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 GJD3Q8N144 294 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 RETREG2Q8NC44 543 aa19.46■□□□□ 0.71
NECTIN1-202ENST00000340882 PLA2G6O60733 806 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 BAIAP3O94812 1187 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 TSPY3P0CV98 308 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 TSPY8P0CW00 308 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 NFRKBQ6P4R8 1299 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 LMCD1Q9NZU5 365 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 CCPG1Q9ULG6 757 aa19.45■□□□□ 0.7
NECTIN1-202ENST00000340882 NFIBO00712 420 aa19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 RCSD1Q6JBY9 416 aa19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 IFNL3Q8IZI9 196 aa19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 APPBP2Q92624 585 aa19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 INCENPQ9NQS7 918 aa19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 GPHNQ9NQX3 736 aaPredicted RBP19.44■□□□□ 0.7
NECTIN1-202ENST00000340882 TRIOO75962 3097 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 NMT2O60551 498 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 HMMRO75330 724 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 APPP05067 770 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 KCNA5P22460 613 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 KCNJ6P48051 423 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 LEXMQ3ZCV2 418 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 TTBK2Q6IQ55 1244 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 SLC30A10Q6XR72 485 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 KBTBD3Q8NAB2 608 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 UIMC1Q96RL1 719 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 IL17RBQ9NRM6 502 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 ZBTB40Q9NUA8 1239 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 MTMR7Q9Y216 660 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 C5orf42Q9H799 3197 aa19.43■□□□□ 0.7
NECTIN1-202ENST00000340882 LINC01553A4QN01 128 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 A6NJR5 290 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 RNF113AO15541 343 aaKnown RBP19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ICAM1P05362 532 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 CHMP4BP1P59074 171 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 ERVK-21P61565 698 aa19.42■□□□□ 0.7
NECTIN1-202ENST00000340882 BFSP2Q13515 415 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms