RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 GSDMAQ96QA5 445 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 ZNF341Q9BYN7 854 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 KANSL2Q9H9L4 492 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 IMPACTQ9P2X3 320 aa12.53□□□□□ -0.4
LRP1-202ENST00000338962 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 CBFA2T2O43439 604 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 RAD21O60216 631 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 PRPHP41219 470 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 DPYDQ12882 1025 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 LDLRAD1Q5T700 205 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 TMEM60Q9H2L4 133 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 JMJD4Q9H9V9 463 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 FANCLQ9NW38 375 aa12.52□□□□□ -0.4
LRP1-202ENST00000338962 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.41
LRP1-202ENST00000338962 DYNC1I1O14576 645 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 CDC25AP30304 524 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 UBA7P41226 1012 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 STAT6P42226 847 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 ADCY7P51828 1080 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 UBASH3AP57075 661 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 JAKMIP3Q5VZ66 844 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 PDXDC2PQ6P474 469 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.52□□□□□ -0.41
LRP1-202ENST00000338962 TBCKQ8TEA7 893 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 COA7Q96BR5 231 aa12.52□□□□□ -0.41
LRP1-202ENST00000338962 GBA2Q9HCG7 927 aaPredicted RBP12.52□□□□□ -0.41
LRP1-202ENST00000338962 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.41
LRP1-202ENST00000338962 POLR2AP24928 1970 aaKnown RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 CTNND1O60716 968 aaKnown RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 EEF2P13639 858 aaKnown RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 CASP1P29466 404 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 RRP1BQ14684 758 aaKnown RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 CT47A1Q5JQC4 288 aaPredicted RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 TMEM179Q6ZVK1 233 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 ARMC9Q7Z3E5 817 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 C2orf69Q8N8R5 385 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 ENOX1Q8TC92 643 aaKnown RBP12.51□□□□□ -0.41
LRP1-202ENST00000338962 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 NFE2L3Q9Y4A8 694 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 MYH4Q9Y623 1939 aa12.51□□□□□ -0.41
LRP1-202ENST00000338962 OR52Z1P0C646 297 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 SLC16A2P36021 539 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 CAP2P40123 477 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 SLC1A4P43007 532 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 IREB2P48200 963 aaKnown RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 ICA1Q05084 483 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 KARSQ15046 597 aaKnown RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 STAMQ92783 540 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 AK8Q96MA6 479 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 ZNF408Q9H9D4 720 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 FZD1Q9UP38 647 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 SIPA1L1O43166 1804 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 ZBTB5O15062 677 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 DHX8Q14562 1220 aaKnown RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 ABCB5Q2M3G0 1257 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 TRMT44Q8IYL2 757 aaKnown RBP12.5□□□□□ -0.41
LRP1-202ENST00000338962 MKL1Q969V6 931 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 WRNIP1Q96S55 665 aa12.5□□□□□ -0.41
LRP1-202ENST00000338962 UQCRHLA0A096LP55 91 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 GTPBP6O43824 516 aaPredicted RBP12.49□□□□□ -0.41
LRP1-202ENST00000338962 UQCRHP07919 91 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 CDK11BP21127 795 aaKnown RBP12.49□□□□□ -0.41
LRP1-202ENST00000338962 SEPT2Q15019 361 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 SHROOM1Q2M3G4 852 aaPredicted RBP12.49□□□□□ -0.41
LRP1-202ENST00000338962 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 MOB2Q70IA6 237 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 ANKRD13AQ8IZ07 590 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 CCDC150Q8NCX0 1101 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 DCAF4Q8WV16 495 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 CUL5Q93034 780 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 BLZF1Q9H2G9 400 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 TMEM260Q9NX78 707 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 TMEM88BA6NKF7 163 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 USP17L10C9JJH3 530 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 GDF11O95390 407 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 SKILP12757 684 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 SFPQP23246 707 aaKnown RBP eCLIP12.49□□□□□ -0.41
LRP1-202ENST00000338962 INPP5BP32019 993 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 CUL4BQ13620 913 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 PRKG1Q13976 671 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 HSP90AA4PQ58FG1 418 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 KLHL10Q6JEL2 608 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 SAPCD2Q86UD0 394 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 CCSER1Q9C0I3 900 aa12.49□□□□□ -0.41
LRP1-202ENST00000338962 RIC8AQ9NPQ8 531 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms