RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 TMEM266Q2M3C6 531 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 LUC7LQ9NQ29 371 aaKnown RBP15.67■□□□□ 0.1
PCDH8-201ENST00000338862 FMN2Q9NZ56 1722 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 ABCC12Q96J65 1359 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 G3V3G9 751 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 ALX1Q15699 326 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 DCAF8Q5TAQ9 597 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 OR2W6PQ8NHA6 318 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 GIMAP7Q8NHV1 300 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 COA7Q96BR5 231 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 LSM14BQ9BX40 385 aaKnown RBP15.67■□□□□ 0.1
PCDH8-201ENST00000338862 TMEM260Q9NX78 707 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 RAB21Q9UL25 225 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 FAM184BQ9ULE4 1060 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 SRCAPQ6ZRS2 3230 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 HIBADHP31937 336 aaKnown RBP15.67■□□□□ 0.1
PCDH8-201ENST00000338862 LONP1P36776 959 aaKnown RBP15.67■□□□□ 0.1
PCDH8-201ENST00000338862 IL17AQ16552 155 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 NT5DC1Q5TFE4 455 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 TRAPPC11Q7Z392 1133 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 TBC1D5Q92609 795 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 HYOU1Q9Y4L1 999 aa15.67■□□□□ 0.1
PCDH8-201ENST00000338862 ECM2O94769 699 aaPredicted RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 SYF2O95926 243 aaKnown RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 USP8P40818 1118 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 ADSSL1Q8N142 457 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 TMEM110-MUSTN1A8MSY1 372 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 SLC1A4P43007 532 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 CARSP49589 748 aaKnown RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 ERFEQ4G0M1 354 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 CFAP221Q4G0U5 840 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 APTXQ7Z2E3 356 aaKnown RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 NBPF5PQ86XG9 351 aaPredicted RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 SHISA4Q96DD7 197 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 OSBPL9Q96SU4 736 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 RGPD2P0DJD1 1756 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 MYO1FO00160 1098 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 PLS1Q14651 629 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 HERC4Q5GLZ8 1057 aaPredicted RBP15.66■□□□□ 0.1
PCDH8-201ENST00000338862 KRT79Q5XKE5 535 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 SELENOSQ9BQE4 189 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 NDST4Q9H3R1 872 aa15.66■□□□□ 0.1
PCDH8-201ENST00000338862 OR52Z1P0C646 297 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 KLHL30Q0D2K2 578 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 FAM133AQ8N9E0 248 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CELF1Q92879 486 aaKnown RBP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 NUP58Q9BVL2 599 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 C6orf50Q9HD87 102 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CAPN11Q9UMQ6 739 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 NKRFO15226 690 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 E2F5Q15329 346 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CNNM4Q6P4Q7 775 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CPLX4Q7Z7G2 160 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 DDX42Q86XP3 938 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 TICAM2Q86XR7 235 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 IFT20Q8IY31 132 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 LRRC47Q8N1G4 583 aaKnown RBP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 PCDHA4Q9UN74 947 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CYP19A1P11511 503 aaPredicted RBP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CCNE1P24864 410 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 CRKLP46109 303 aaKnown RBP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
PCDH8-201ENST00000338862 PDXDC2PQ6P474 469 aa15.65■□□□□ 0.1
PCDH8-201ENST00000338862 A0A087WUV0 522 aaPredicted RBP15.64■□□□□ 0.09
PCDH8-201ENST00000338862 ACTN3Q08043 901 aaPredicted RBP15.64■□□□□ 0.09
PCDH8-201ENST00000338862 WDR59Q6PJI9 974 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 EFCAB13Q8IY85 973 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 STIM2Q9P246 746 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 FAM237AA0A1B0GTK4 181 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 PALMO75781 387 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 ABCB4P21439 1286 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 SEC23AQ15436 765 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 CALCRLQ16602 461 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 SLC9C1Q4G0N8 1177 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 TSGA10Q9BZW7 698 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 DCP1AQ9NPI6 582 aaPredicted RBP15.64■□□□□ 0.09
PCDH8-201ENST00000338862 PSD3Q9NYI0 1048 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 SEMA3EO15041 775 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 PFKFB3Q16875 520 aaPredicted RBP15.64■□□□□ 0.09
PCDH8-201ENST00000338862 CCDC121Q6ZUS5 278 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 CLEC10AQ8IUN9 316 aa15.64■□□□□ 0.09
PCDH8-201ENST00000338862 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.64■□□□□ 0.09
PCDH8-201ENST00000338862 EPHB6O15197 1021 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 BUB1BO60566 1050 aaPredicted RBP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 TRIM28Q13263 835 aaKnown RBP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CCDC25Q86WR0 208 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 PIGSQ96S52 555 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 LDHBP07195 334 aaKnown RBP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 TSEN2Q8NCE0 465 aaKnown RBP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 SNX12Q9UMY4 172 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CTNNA1P35221 906 aaKnown RBP15.63■□□□□ 0.09
PCDH8-201ENST00000338862 PDE6BP35913 854 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 CORO7P57737 925 aa15.63■□□□□ 0.09
PCDH8-201ENST00000338862 SFMBT2Q5VUG0 894 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms