RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 IGKV6D-41A0A0C4DH26 115 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 CCDC194A0A1B0GVG4 234 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 SMCHD1A6NHR9 2005 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 WNT7AO00755 349 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 ADAMTS3O15072 1205 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 TTLL1O95922 423 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 RBM5P52756 815 aaKnown RBP eCLIP9.91□□□□□ -0.82
LSAMP-201ENST00000333617 POSTNQ15063 836 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 ISM2Q6H9L7 571 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 PDILTQ8N807 584 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 MRFAP1L1Q96HT8 127 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 BEGAINQ9BUH8 593 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 EHD4Q9H223 541 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 SEC63Q9UGP8 760 aaKnown RBP9.91□□□□□ -0.82
LSAMP-201ENST00000333617 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
LSAMP-201ENST00000333617 FER1L6Q2WGJ9 1857 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 VWA3AA6NCI4 1184 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 USP17L5A8MUK1 530 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 M0R2N6 131 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 PDHBP11177 359 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 MCM7P33993 719 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 SHMT1P34896 483 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 NAPAP54920 295 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 NFIAQ12857 509 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 SF3B2Q13435 895 aaKnown RBP9.9□□□□□ -0.82
LSAMP-201ENST00000333617 ASPRV1Q53RT3 343 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 USP49Q70CQ1 688 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 RASGRP2Q7LDG7 609 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 FOXP4Q8IVH2 680 aaPredicted RBP9.9□□□□□ -0.82
LSAMP-201ENST00000333617 PARP9Q8IXQ6 854 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 DHX36Q9H2U1 1008 aaKnown RBP9.9□□□□□ -0.82
LSAMP-201ENST00000333617 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 TOR4AQ9NXH8 423 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 CLIP2Q9UDT6 1046 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 PCDHA6Q9UN73 950 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 PCDHA8Q9Y5H6 950 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 PCDHA5Q9Y5H7 936 aa9.9□□□□□ -0.82
LSAMP-201ENST00000333617 ATAD5Q96QE3 1844 aa9.9□□□□□ -0.83
LSAMP-201ENST00000333617 FRMPD2Q68DX3 1309 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 MPHOSPH10O00566 681 aaKnown RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 IKBKBO14920 756 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 FOXN1O15353 648 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 C21orf2O43822 256 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 PTGS1P23219 599 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 GNA11P29992 359 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 BAG6P46379 1132 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 SOGA3Q5TF21 947 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 NT5DC1Q5TFE4 455 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 ARL6IP4Q66PJ3 421 aaKnown RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 HOMER1Q86YM7 354 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 LRRC47Q8N1G4 583 aaKnown RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 RASGRP4Q8TDF6 673 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 SMARCE1Q969G3 411 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 DHX58Q96C10 678 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 EPSTI1Q96J88 318 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 CCDC17Q96LX7 622 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 PYM1Q9BRP8 204 aaKnown RBP9.89□□□□□ -0.83
LSAMP-201ENST00000333617 IDI2Q9BXS1 227 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 UBA5Q9GZZ9 404 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 ZMYND12Q9H0C1 365 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 RIOX1Q9H6W3 641 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 VAT1LQ9HCJ6 419 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 C6orf50Q9HD87 102 aa9.89□□□□□ -0.83
LSAMP-201ENST00000333617 MOXD2PA6NHM9 499 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 hCG_1984214I3L0E3 225 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 OFD1O75665 1012 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 SMC2O95347 1197 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 SLFN14P0C7P3 912 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 SNHG28P0DPA3 235 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 NDUFV2P19404 249 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 CACNB3P54284 484 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 EIF6P56537 245 aaKnown RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 TCP10Q12799 353 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 NCAPHQ15003 741 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 CCDC93Q567U6 631 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 CCDC186Q7Z3E2 898 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 ZFPM1Q8IX07 1006 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 TTLL6Q8N841 843 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 ZNF713Q8N859 430 aaPredicted RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 TRIML1Q8N9V2 468 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 PIGSQ96S52 555 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 TRIM34Q9BYJ4 488 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 KCNF1Q9H3M0 494 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 PI4KBQ9UBF8 816 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 MAN1B1Q9UKM7 699 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 PCDHAC2Q9Y5I4 1007 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 A0A087X0B3 334 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 SMCO2A6NFE2 343 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 LONP1P36776 959 aaKnown RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 SARSP49591 514 aaKnown RBP9.88□□□□□ -0.83
LSAMP-201ENST00000333617 ATP2B2Q01814 1243 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 MYL5Q02045 173 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 INF2Q27J81 1249 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 CLEC10AQ8IUN9 316 aa9.88□□□□□ -0.83
LSAMP-201ENST00000333617 GRAMD1CQ8IYS0 662 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms