RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
SUMO3-201ENST00000332859 USP17L6PQ6QN14 398 aa22.78■■□□□ 1.24
SUMO3-201ENST00000332859 NAP1L4Q99733 375 aaKnown RBP22.78■■□□□ 1.24
SUMO3-201ENST00000332859 TANGO6Q9C0B7 1094 aa22.78■■□□□ 1.24
SUMO3-201ENST00000332859 TAF1DQ9H5J8 278 aaPredicted RBP22.78■■□□□ 1.24
SUMO3-201ENST00000332859 TTC12Q9H892 705 aaPredicted RBP22.78■■□□□ 1.24
SUMO3-201ENST00000332859 TUBE1Q9UJT0 475 aa22.78■■□□□ 1.24
SUMO3-201ENST00000332859 MEIS2O14770 477 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 NF2P35240 595 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 SAMD1Q6SPF0 538 aaPredicted RBP22.77■■□□□ 1.24
SUMO3-201ENST00000332859 DTHD1Q6ZMT9 781 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 SPC24Q8NBT2 197 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 SYMPKQ92797 1274 aaKnown RBP22.77■■□□□ 1.24
SUMO3-201ENST00000332859 MRFAP1L1Q96HT8 127 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 C12orf42Q96LP6 360 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 TMEM60Q9H2L4 133 aa22.77■■□□□ 1.24
SUMO3-201ENST00000332859 OR52Z1P0C646 297 aa22.76■■□□□ 1.23
SUMO3-201ENST00000332859 KRBA2Q6ZNG9 492 aa22.76■■□□□ 1.23
SUMO3-201ENST00000332859 ZNF830Q96NB3 372 aaPredicted RBP22.76■■□□□ 1.23
SUMO3-201ENST00000332859 ANO3Q9BYT9 981 aa22.76■■□□□ 1.23
SUMO3-201ENST00000332859 RPAP3Q9H6T3 665 aaPredicted RBP22.76■■□□□ 1.23
SUMO3-201ENST00000332859 MRPL11Q9Y3B7 192 aaKnown RBP22.76■■□□□ 1.23
SUMO3-201ENST00000332859 PHIPQ8WWQ0 1821 aa22.76■■□□□ 1.23
SUMO3-201ENST00000332859 ABCB11O95342 1321 aa22.76■■□□□ 1.23
SUMO3-201ENST00000332859 FOSP01100 380 aaPredicted RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 IREB2P48200 963 aaKnown RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 TERF1P54274 439 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 DGKZQ13574 1117 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 IL17AQ16552 155 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 DLK2Q6UY11 383 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 USP49Q70CQ1 688 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 CNNM3Q8NE01 707 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 CDCA5Q96FF9 252 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 HOOK1Q9UJC3 728 aaKnown RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 WDR90Q96KV7 1748 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 PAPPA2Q9BXP8 1791 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 POLR2DO15514 142 aaKnown RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 GCFC2P16383 781 aaKnown RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 LONRF3Q496Y0 759 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 PNMA8AQ86V59 439 aaPredicted RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 DRC7Q8IY82 874 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 ERCC4Q92889 916 aaPredicted RBP22.75■■□□□ 1.23
SUMO3-201ENST00000332859 EPSTI1Q96J88 318 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 CSADQ9Y600 493 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 SNCAIPQ9Y6H5 919 aa22.75■■□□□ 1.23
SUMO3-201ENST00000332859 PIK3CDO00329 1044 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 OPLAHO14841 1288 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 FLOT1O75955 427 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 TAL1P17542 331 aaPredicted RBP22.74■■□□□ 1.23
SUMO3-201ENST00000332859 VGLL4Q14135 290 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 EAPPQ56P03 285 aaPredicted RBP22.74■■□□□ 1.23
SUMO3-201ENST00000332859 PPP4R3AQ6IN85 833 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.74■■□□□ 1.23
SUMO3-201ENST00000332859 LDHDQ86WU2 507 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 AOPEPQ8N6M6 819 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 PYM1Q9BRP8 204 aaKnown RBP22.74■■□□□ 1.23
SUMO3-201ENST00000332859 PPP1R9AQ9ULJ8 1098 aa22.74■■□□□ 1.23
SUMO3-201ENST00000332859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.73■■□□□ 1.23
SUMO3-201ENST00000332859 SPDYE3A6NKU9 549 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 SMTNL1A8MU46 457 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 ICAM1P05362 532 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 FDX1P10109 184 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 TXLNAP40222 546 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 DPCR1Q3MIW9 517 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 CCDC34Q96HJ3 373 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 TMOD4Q9NZQ9 345 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 PNMA2Q9UL42 364 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 AFG3L2Q9Y4W6 797 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 TDP2O95551 362 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 HMGCS2P54868 508 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 TPM4P67936 248 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 CALCRLQ16602 461 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 KANK3Q6NY19 840 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 KCNF1Q9H3M0 494 aa22.73■■□□□ 1.23
SUMO3-201ENST00000332859 EDIL3O43854 480 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 USP11P51784 963 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 POTEDQ86YR6 584 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 PDILTQ8N807 584 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 RBM46Q8TBY0 533 aaKnown RBP22.72■■□□□ 1.23
SUMO3-201ENST00000332859 SLC38A10Q9HBR0 1119 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 SPTLC3Q9NUV7 552 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 SERTAD1Q9UHV2 236 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 CCPG1Q9ULG6 757 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 CTDP1Q9Y5B0 961 aaPredicted RBP22.72■■□□□ 1.23
SUMO3-201ENST00000332859 OTOFQ9HC10 1997 aa22.72■■□□□ 1.23
SUMO3-201ENST00000332859 A0A087WWV3 80 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 POTECB2RU33 542 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 NOLC1Q14978 699 aaKnown RBP eCLIP22.71■■□□□ 1.23
SUMO3-201ENST00000332859 AK8Q96MA6 479 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 UTRNP46939 3433 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 ZNF536O15090 1300 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 GCOM1H8Y6P7 765 aaPredicted RBP22.71■■□□□ 1.23
SUMO3-201ENST00000332859 IKBKBO14920 756 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 ZBED4O75132 1171 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 POLR2MP0CAP2 368 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 MOXD1Q6UVY6 613 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 DHX58Q96C10 678 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 MTMR9Q96QG7 549 aa22.71■■□□□ 1.23
SUMO3-201ENST00000332859 DDX25Q9UHL0 483 aaKnown RBP22.71■■□□□ 1.23
SUMO3-201ENST00000332859 ACTN4O43707 911 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms