RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 PUS3Q9BZE2 481 aaKnown RBP10.87□□□□□ -0.67
SP1-201ENST00000327443 KIF13BQ9NQT8 1826 aa10.87□□□□□ -0.67
SP1-201ENST00000327443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 PDLIM1O00151 329 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 DNM1LO00429 736 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 LIN7AO14910 233 aaPredicted RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 MYCLP1P12525 358 aaPredicted RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 TRPC1P48995 793 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 KRT85P78386 507 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 CBX3Q13185 183 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 KARSQ15046 597 aaKnown RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 MAIP1Q8WWC4 291 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 PAG1Q9NWQ8 432 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 TFIP11Q9UBB9 837 aaKnown RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 WDR37Q9Y2I8 494 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 MYH13Q9UKX3 1938 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 DYTNA2CJ06 578 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 AGPSO00116 658 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 NDUFB5O43674 189 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 KIF5CO60282 957 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 CEP104O60308 925 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 CLTAP09496 248 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 NFIXQ14938 502 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 DPY19L2Q6NUT2 758 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 ZNF594Q96JF6 807 aaPredicted RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 CRAMP1Q96RY5 1269 aa10.86□□□□□ -0.67
SP1-201ENST00000327443 ACTR5Q9H9F9 607 aaPredicted RBP10.86□□□□□ -0.67
SP1-201ENST00000327443 TESPA1A2RU30 521 aaPredicted RBP10.85□□□□□ -0.67
SP1-201ENST00000327443 GOLGA6L9A6NEM1 432 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 IFIT1P09914 478 aaKnown RBP10.85□□□□□ -0.67
SP1-201ENST00000327443 STX1AQ16623 288 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 WHAMMP3Q1A5X7 153 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 KIAA0753Q2KHM9 967 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 PABPC1LQ4VXU2 614 aaKnown RBP10.85□□□□□ -0.67
SP1-201ENST00000327443 ZMYM1Q5SVZ6 1142 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 SH3GL2Q99962 352 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 LRRD1A4D1F6 860 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 BPIFB4P59827 614 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 ZNF394Q53GI3 561 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 USP33Q8TEY7 942 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 ZNF473Q8WTR7 871 aaKnown RBP10.85□□□□□ -0.67
SP1-201ENST00000327443 MAP4K1Q92918 833 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 DSCC1Q9BVC3 393 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 SLC5A4Q9NY91 659 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 TIAM2Q8IVF5 1701 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 COL4A1P02462 1669 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 SLMAPQ14BN4 828 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 TTC39AQ5SRH9 613 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 MYOCDQ8IZQ8 938 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 SYNE4Q8N205 404 aa10.85□□□□□ -0.67
SP1-201ENST00000327443 SRP68Q9UHB9 627 aaKnown RBP10.85□□□□□ -0.67
SP1-201ENST00000327443 IRS2Q9Y4H2 1338 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 N4BP3O15049 544 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 ALDH3A1P30838 453 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 STIP1P31948 543 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 ATP1A2P50993 1020 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 HDLBPQ00341 1268 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 TMED1Q13445 227 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 DRP2Q13474 957 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 GRAPQ13588 217 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 POSTNQ15063 836 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 CNBD1Q8NA66 436 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 GRAPLQ8TC17 118 aaPredicted RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 CAMKK2Q96RR4 588 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 FSD1Q9BTV5 496 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 POLR3CQ9BUI4 534 aaPredicted RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.67
SP1-201ENST00000327443 CDC23Q9UJX2 597 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 BARX2Q9UMQ3 279 aaPredicted RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 POLRMTO00411 1230 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 FLT3P36888 993 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 NT5C2P49902 561 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 TUBP50607 506 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 ELF3P78545 371 aaPredicted RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 DYNC1I2Q13409 638 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 UBE3CQ15386 1083 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 MCMDC2Q4G0Z9 681 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 SPECC1Q5M775 1068 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 HIBCHQ6NVY1 386 aaPredicted RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 SAMD3Q8N6K7 520 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 NOA1Q8NC60 698 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 COG1Q8WTW3 980 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 OPTNQ96CV9 577 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 SENP2Q9HC62 589 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 ZNHIT6Q9NWK9 470 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 PAIP2BQ9ULR5 123 aaKnown RBP10.84□□□□□ -0.67
SP1-201ENST00000327443 LEMD3Q9Y2U8 911 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 SPO11Q9Y5K1 396 aa10.84□□□□□ -0.67
SP1-201ENST00000327443 PFDN1O60925 122 aa10.83□□□□□ -0.68
SP1-201ENST00000327443 APBA3O96018 575 aa10.83□□□□□ -0.68
SP1-201ENST00000327443 GJB2P29033 226 aa10.83□□□□□ -0.68
SP1-201ENST00000327443 HDAC4P56524 1084 aa10.83□□□□□ -0.68
SP1-201ENST00000327443 RPS8P62241 208 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms