RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 CNPY4Q8N129 248 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 TGFBRAP1Q8WUH2 860 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 HDAC7Q8WUI4 952 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 UIMC1Q96RL1 719 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 SELENOOQ9BVL4 669 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 CAPN11Q9UMQ6 739 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 EBAG9O00559 213 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
NLRC3-201ENST00000324659 STK4Q13043 487 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 MAP9Q49MG5 647 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 PNMA1Q8ND90 353 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 DNAJC7Q99615 494 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 BRIP1Q9BX63 1249 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 EHD4Q9H223 541 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 SPATA31A5Q5VU36 1347 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 SPATA31A7Q8IWB4 1347 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 MYH13Q9UKX3 1938 aa13.43□□□□□ -0.26
NLRC3-201ENST00000324659 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 PLCG1P19174 1290 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 NAP1L1P55209 391 aaKnown RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 KIF5AQ12840 1032 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 ANKRD40Q6AI12 368 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 SND1Q7KZF4 910 aaKnown RBP eCLIP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 ZNF444Q8N0Y2 327 aaPredicted RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 SLC44A5Q8NCS7 719 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 CCDC42Q96M95 316 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 SLC39A2Q9NP94 309 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 MED4Q9NPJ6 270 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 UBE4AQ14139 1066 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 C2CD5Q86YS7 1000 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 ZNF507Q8TCN5 953 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 TAF1P21675 1872 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 ZNF804BA4D1E1 1349 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 PDS5AQ29RF7 1337 aaKnown RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 COL4A1P02462 1669 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 UFL1O94874 794 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 MOCS3O95396 460 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 KIF5BP33176 963 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 DNM2P50570 870 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 SPA17Q15506 151 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 C4orf32Q8N8J7 132 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 COG1Q8WTW3 980 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 NYXQ9GZU5 481 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 MMRN2Q9H8L6 949 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 KCNG1Q9UIX4 513 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 PCDHA4Q9UN74 947 aa13.42□□□□□ -0.26
NLRC3-201ENST00000324659 CICQ96RK0 1608 aaPredicted RBP13.42□□□□□ -0.26
NLRC3-201ENST00000324659 DUOX1Q9NRD9 1551 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 NCK2O43639 380 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 KLRC4O43908 158 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 CCNT1O60563 726 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 EEF1GP26641 437 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 CALML3P27482 149 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 HNRNPH1P31943 449 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 TUBB4BP68371 445 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 ENOX2Q16206 610 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 KAT2BQ92831 832 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 NSUN4Q96CB9 384 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 PYM1Q9BRP8 204 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 CAPN6Q9Y6Q1 641 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 DOCK2Q92608 1830 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 TECP42680 631 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 CKAP4Q07065 602 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 NFIXQ14938 502 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 RASSF10A6NK89 507 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 KCTD19Q17RG1 926 aaPredicted RBP13.41□□□□□ -0.26
NLRC3-201ENST00000324659 NFRKBQ6P4R8 1299 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 GBP6Q6ZN66 633 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 DYMQ7RTS9 669 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 CABP7Q86V35 215 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 FAM169AQ9Y6X4 670 aa13.41□□□□□ -0.26
NLRC3-201ENST00000324659 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 TSPY3P0CV98 308 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 TSPY8P0CW00 308 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 SRGNP10124 158 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 ARL6IP4Q66PJ3 421 aaKnown RBP13.4□□□□□ -0.26
NLRC3-201ENST00000324659 LRRC1Q9BTT6 524 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 IFIH1Q9BYX4 1025 aaKnown RBP13.4□□□□□ -0.26
NLRC3-201ENST00000324659 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 DMGDHQ9UI17 866 aaKnown RBP13.4□□□□□ -0.26
NLRC3-201ENST00000324659 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.4□□□□□ -0.26
NLRC3-201ENST00000324659 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
NLRC3-201ENST00000324659 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.26
NLRC3-201ENST00000324659 CAPN7Q9Y6W3 813 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms