RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 TSHZ3Q63HK5 1081 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 NSMFQ6X4W1 530 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 IFNL3Q8IZI9 196 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 ARNTL2Q8WYA1 636 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 VTA1Q9NP79 307 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 SCN5AQ14524 2016 aa23.28■■□□□ 1.32
SSNA1-201ENST00000322310 LCTP09848 1927 aa23.27■■□□□ 1.32
SSNA1-201ENST00000322310 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
SSNA1-201ENST00000322310 MS4A1P11836 297 aa23.27■■□□□ 1.32
SSNA1-201ENST00000322310 GNAT2P19087 354 aa23.27■■□□□ 1.32
SSNA1-201ENST00000322310 PURAQ00577 322 aaKnown RBP23.27■■□□□ 1.32
SSNA1-201ENST00000322310 PRR12Q9ULL5 1215 aa23.27■■□□□ 1.32
SSNA1-201ENST00000322310 TLL1O43897 1013 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 MYL3P08590 195 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 TAP1Q03518 808 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 DUSP28Q4G0W2 176 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 SPRED2Q7Z698 418 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 MORC4Q8TE76 937 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 POLR3EQ9NVU0 708 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 CCPG1Q9ULG6 757 aa23.26■■□□□ 1.31
SSNA1-201ENST00000322310 PATL2C9JE40 543 aaKnown RBP23.25■■□□□ 1.31
SSNA1-201ENST00000322310 ACTN1P12814 892 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 PDE4BQ07343 736 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 FAM47CQ5HY64 1035 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 SLC9A7Q96T83 725 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 WDR11Q9BZH6 1224 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 COG5Q9UP83 839 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 HCN4Q9Y3Q4 1203 aa23.25■■□□□ 1.31
SSNA1-201ENST00000322310 PLA2G6O60733 806 aa23.24■■□□□ 1.31
SSNA1-201ENST00000322310 RCSD1Q6JBY9 416 aa23.24■■□□□ 1.31
SSNA1-201ENST00000322310 HERC6Q8IVU3 1022 aa23.24■■□□□ 1.31
SSNA1-201ENST00000322310 KHSRPQ92945 711 aaKnown RBP eCLIP23.24■■□□□ 1.31
SSNA1-201ENST00000322310 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
SSNA1-201ENST00000322310 STX8Q9UNK0 236 aa23.24■■□□□ 1.31
SSNA1-201ENST00000322310 MTMR7Q9Y216 660 aa23.24■■□□□ 1.31
SSNA1-201ENST00000322310 NMT2O60551 498 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 CPT1AP50416 773 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 ALDH5A1P51649 535 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-201ENST00000322310 BAATQ14032 418 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-201ENST00000322310 NBPF20Q3BBV1 942 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 TMEM31Q5JXX7 168 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 OR6J1Q8NGC5 347 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 HLA-CQ95604 372 aa23.23■■□□□ 1.31
SSNA1-201ENST00000322310 MTG1Q9BT17 334 aaPredicted RBP23.23■■□□□ 1.31
SSNA1-201ENST00000322310 FTOQ9C0B1 505 aaKnown RBP eCLIP23.23■■□□□ 1.31
SSNA1-201ENST00000322310 ZFYP08048 801 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-201ENST00000322310 PPARAQ07869 468 aa23.22■■□□□ 1.31
SSNA1-201ENST00000322310 GRB10Q13322 594 aa23.22■■□□□ 1.31
SSNA1-201ENST00000322310 PHOSPHO2Q8TCD6 241 aa23.22■■□□□ 1.31
SSNA1-201ENST00000322310 NACAP1Q9BZK3 213 aa23.22■■□□□ 1.31
SSNA1-201ENST00000322310 GPHNQ9NQX3 736 aaPredicted RBP23.22■■□□□ 1.31
SSNA1-201ENST00000322310 NFIBO00712 420 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 ICAM1P05362 532 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 IQCF3P0C7M6 154 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 RFC2P35250 354 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 NAPBQ9H115 298 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 INCENPQ9NQS7 918 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 IL17RBQ9NRM6 502 aa23.21■■□□□ 1.31
SSNA1-201ENST00000322310 ADD3Q9UEY8 706 aaKnown RBP23.21■■□□□ 1.31
SSNA1-201ENST00000322310 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
SSNA1-201ENST00000322310 LPXNO60711 386 aa23.2■■□□□ 1.3
SSNA1-201ENST00000322310 SLC3A2P08195 630 aaKnown RBP23.2■■□□□ 1.3
SSNA1-201ENST00000322310 RETREG2Q8NC44 543 aa23.2■■□□□ 1.3
SSNA1-201ENST00000322310 C11orf16Q9NQ32 467 aa23.2■■□□□ 1.3
SSNA1-201ENST00000322310 ARIH1Q9Y4X5 557 aaPredicted RBP23.2■■□□□ 1.3
SSNA1-201ENST00000322310 TANC1Q9C0D5 1861 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 COL4A4P53420 1690 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-201ENST00000322310 RBM47A0AV96 593 aaKnown RBP23.19■■□□□ 1.3
SSNA1-201ENST00000322310 KIF28PB7ZC32 967 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 SLC16A2P36021 539 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 CCDC96Q2M329 555 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 TTBK2Q6IQ55 1244 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 TMCO2Q7Z6W1 182 aaPredicted RBP23.19■■□□□ 1.3
SSNA1-201ENST00000322310 GPATCH3Q96I76 525 aa23.19■■□□□ 1.3
SSNA1-201ENST00000322310 RANBP17Q9H2T7 1088 aaKnown RBP23.19■■□□□ 1.3
SSNA1-201ENST00000322310 PTPDC1A2A3K4 754 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 LCHNA4D1U4 455 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 TSPY2A6NKD2 308 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 CTDSPL2Q05D32 466 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 NFRKBQ6P4R8 1299 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 SLC30A10Q6XR72 485 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 COPS5Q92905 334 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.18■■□□□ 1.3
SSNA1-201ENST00000322310 SCN10AQ9Y5Y9 1956 aa23.18■■□□□ 1.3
SSNA1-201ENST00000322310 CALML3P27482 149 aa23.17■■□□□ 1.3
SSNA1-201ENST00000322310 CHMP4BP1P59074 171 aa23.17■■□□□ 1.3
SSNA1-201ENST00000322310 GDPD5Q8WTR4 605 aa23.17■■□□□ 1.3
SSNA1-201ENST00000322310 CD320Q9NPF0 282 aa23.17■■□□□ 1.3
SSNA1-201ENST00000322310 RBAK-RBAKDNI3L0D1 243 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 BFSP2Q13515 415 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 PPP2R5BQ15173 497 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 BRDTQ58F21 947 aaPredicted RBP23.16■■□□□ 1.3
SSNA1-201ENST00000322310 PPP4R3BQ5MIZ7 849 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 CHMP4BQ9H444 224 aaKnown RBP23.16■■□□□ 1.3
SSNA1-201ENST00000322310 NOD1Q9Y239 953 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 PTPRSQ13332 1948 aa23.16■■□□□ 1.3
SSNA1-201ENST00000322310 TET1Q8NFU7 2136 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 RAD50Q92878 1312 aa23.15■■□□□ 1.3
SSNA1-201ENST00000322310 A6NJR5 290 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms