RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 KCTD2Q14681 263 aa27.3■■□□□ 1.96
TNFSF12-202ENST00000322272 GPATCH4Q5T3I0 446 aaKnown RBP27.3■■□□□ 1.96
TNFSF12-202ENST00000322272 PLEKHA8P1O95397 391 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 FOSBP53539 338 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 CCDC174Q6PII3 467 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 BTNL9Q6UXG8 535 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 LZTS2Q9BRK4 669 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 ZSCAN16Q9H4T2 348 aaPredicted RBP27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 SLC5A4Q9NY91 659 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 RPTORQ8N122 1335 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 CNTNAP5Q8WYK1 1306 aa27.29■■□□□ 1.96
TNFSF12-202ENST00000322272 MKI67P46013 3256 aaKnown RBP27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 FUT2Q10981 343 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 MAP3K21Q5TCX8 1036 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 SYDE2Q5VT97 1194 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 FBXO18Q8NFZ0 1043 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 HMX1Q9NP08 348 aaPredicted RBP27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 RBM27Q9P2N5 1060 aaKnown RBP27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 MAD2L2Q9UI95 211 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 ZNF536O15090 1300 aa27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 RBBP6Q7Z6E9 1792 aaKnown RBP27.28■■□□□ 1.96
TNFSF12-202ENST00000322272 PGK2P07205 417 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 GOLGA8HP0CJ92 632 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 GJA8P48165 433 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 CACNB2Q08289 660 aaPredicted RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 TRIM29Q14134 588 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 CMTR1Q8N1G2 835 aaKnown RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 AGBL1Q96MI9 1066 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 PAK6Q9NQU5 681 aaPredicted RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 HOMER2Q9NSB8 354 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 PALM3A6NDB9 673 aaPredicted RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 PRPF3O43395 683 aaKnown RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 MFSD14CQ5VZR4 134 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 MCTP1Q6DN14 999 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 FERMT3Q86UX7 667 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 CCDC82Q8N4S0 544 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 U2AF1L4Q8WU68 220 aaKnown RBP27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 DEFB118Q96PH6 123 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 ZNF236Q9UL36 1845 aa27.27■■□□□ 1.96
TNFSF12-202ENST00000322272 KLRF2D3W0D1 207 aa27.26■■□□□ 1.95
TNFSF12-202ENST00000322272 RESTQ13127 1097 aa27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 STAG2Q8N3U4 1231 aa27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 SRBD1Q8N5C6 995 aaKnown RBP27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 CHST13Q8NET6 341 aa27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 SHISA4Q96DD7 197 aa27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 RANBP17Q9H2T7 1088 aaKnown RBP27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 FBXO40Q9UH90 709 aa27.25■■□□□ 1.95
TNFSF12-202ENST00000322272 SGPL1O95470 568 aa27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 CYP2C19P33261 490 aa27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 GUCY1B3Q02153 619 aa27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 OLFML2BQ68BL8 750 aa27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 AIFM3Q96NN9 605 aa27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 BAZ2BQ9UIF8 2168 aaKnown RBP27.24■■□□□ 1.95
TNFSF12-202ENST00000322272 ALAS1P13196 640 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 MAML3Q96JK9 1138 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 UBA5Q9GZZ9 404 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 FOXD4L6Q3SYB3 417 aaPredicted RBP27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 FOXD4L3Q6VB84 417 aaPredicted RBP27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 ANKRD35Q8N283 1001 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 CPVLQ9H3G5 476 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 ACAD9Q9H845 621 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 RNF146Q9NTX7 359 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 CCPG1Q9ULG6 757 aa27.23■■□□□ 1.95
TNFSF12-202ENST00000322272 IGHA2P01877 340 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 ICAM1P05362 532 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 XBP1P17861 261 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 CCND3P30281 292 aaPredicted RBP27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 ZNF792Q3KQV3 632 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 KRT40Q6A162 431 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 TRERF1Q96PN7 1200 aa27.22■■□□□ 1.95
TNFSF12-202ENST00000322272 TFRCP02786 760 aaKnown RBP27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 SMARCA1P28370 1054 aa27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 TKFCQ3LXA3 575 aa27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 SPZ1Q9BXG8 430 aa27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 V9GY48 417 aaPredicted RBP27.21■■□□□ 1.95
TNFSF12-202ENST00000322272 TAL1P17542 331 aaPredicted RBP27.2■■□□□ 1.95
TNFSF12-202ENST00000322272 DIS3Q9Y2L1 958 aaKnown RBP27.2■■□□□ 1.95
TNFSF12-202ENST00000322272 KRT85P78386 507 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 CSPP1Q1MSJ5 1256 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 CHAMP1Q96JM3 812 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 ANP32EQ9BTT0 268 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 DNAJC25-GNG10A0A024R161 153 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 DNM1Q05193 864 aaKnown RBP27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 PKN1Q16512 942 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 BRAPQ7Z569 592 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 CRISPLD2Q9H0B8 497 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 GJB4Q9NTQ9 266 aa27.19■■□□□ 1.94
TNFSF12-202ENST00000322272 NCLP19338 710 aaKnown RBP27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 CNGA1P29973 690 aa27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 SAFBQ15424 915 aaKnown RBP eCLIP27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 MUM1L1Q5H9M0 696 aa27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 RRP36Q96EU6 259 aaKnown RBP27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 A1CFQ9NQ94 594 aaKnown RBP27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 SEC63Q9UGP8 760 aaKnown RBP27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 CNPY2Q9Y2B0 182 aa27.18■■□□□ 1.94
TNFSF12-202ENST00000322272 CYBAP13498 195 aa27.17■■□□□ 1.94
TNFSF12-202ENST00000322272 SCG2P13521 617 aa27.17■■□□□ 1.94
TNFSF12-202ENST00000322272 PFKFB3Q16875 520 aaPredicted RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms