RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 IFIT1BQ5T764 474 aaKnown RBP3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 RGMBQ6NW40 437 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 ZSCAN29Q8IWY8 852 aaPredicted RBP3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 ABRAQ8N0Z2 381 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 IGDCC4Q8TDY8 1250 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 SEC62Q99442 399 aaKnown RBP3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 MXD3Q9BW11 206 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 RNF26Q9BY78 433 aaPredicted RBP3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 KAT14Q9H8E8 782 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 LY9Q9HBG7 655 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 FBXO40Q9UH90 709 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 FKBPLQ9UIM3 349 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 ADAMTS5Q9UNA0 930 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 LIMCH1Q9UPQ0 1083 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 AGTPBP1Q9UPW5 1226 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 NEDD4P46934 1319 aa3.83□□□□□ -1.8
SCAMP1-201ENST00000320280 CCDC69A6NI79 296 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L15C9J2P7 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L13C9JLJ4 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L11C9JVI0 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L18D6R9N7 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L22D6RA61 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L17D6RBQ6 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L19D6RCP7 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L20D6RJB6 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PRC1O43663 620 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC25A27O95847 323 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 USP17L24Q0WX57 530 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CUL4AQ13619 759 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 RASAL3Q86YV0 1011 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 VWA5B2Q8N398 1253 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNF784Q8NCA9 323 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 DAGLBQ8NCG7 672 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CCDC148Q8NFR7 591 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PDRG1Q9NUG6 133 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 MORF4L1Q9UBU8 362 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 NRBP1Q9UHY1 535 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 TNKSO95271 1327 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 ABCB11O95342 1321 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 B4DLN1 442 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PRKAB2O43741 272 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 XBP1P17861 261 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PDCP20941 246 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PLCD1P51178 756 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 MRPL12P52815 198 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PICALMQ13492 652 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CCDC96Q2M329 555 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 EAPPQ56P03 285 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 INTS6LQ5JSJ4 861 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 ATL3Q6DD88 541 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 XRRA1Q6P2D8 792 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CCDC129Q6ZRS4 1044 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 MEIOBQ8N635 442 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CTCFLQ8NI51 663 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 WRNIP1Q96S55 665 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PARK7Q99497 189 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 TSEN34Q9BSV6 310 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 TMEM39BQ9GZU3 492 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 EHMT1Q9H9B1 1298 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 HOXC10Q9NYD6 342 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 ADGRA2Q96PE1 1338 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 CLRN2A0PK11 232 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PALM3A6NDB9 673 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 FAM181BA6NEQ2 426 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 MINDY4BA8MYZ0 360 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 STAM2O75886 525 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PRKCSHP14314 528 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 IFNAR1P17181 557 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 GUCY1A2P33402 732 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 TFAP4Q01664 338 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 TMEM67Q5HYA8 995 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 NBPF12Q5TAG4 269 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 SLC51AQ86UW1 340 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 KCTD17Q8N5Z5 321 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 ENAHQ8N8S7 591 aaPredicted RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 BICD2Q8TD16 824 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 JAKMIP1Q96N16 626 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 MPHOSPH6Q99547 160 aaKnown RBP3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 RIOX1Q9H6W3 641 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 GPAMQ9HCL2 828 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 NMRK2Q9NPI5 230 aa3.82□□□□□ -1.8
SCAMP1-201ENST00000320280 IFIT3O14879 490 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ZBTB43O43298 467 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PRPF3O43395 683 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PPFIA3O75145 1194 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CELF2O95319 508 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 PARP1P09874 1014 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CASTP20810 708 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CCNA1P78396 465 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNF543Q08ER8 600 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 VGLL4Q14135 290 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 SAPCD2Q86UD0 394 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 HSCBQ8IWL3 235 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ZNF654Q8IZM8 581 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 CHST13Q8NET6 341 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 KIF2CQ99661 725 aa3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 RANBP17Q9H2T7 1088 aaKnown RBP3.81□□□□□ -1.8
SCAMP1-201ENST00000320280 ZSWIM5Q9P217 1185 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms