RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 GTF3C6Q969F1 213 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 STAP2Q9UGK3 403 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 GNAT1P11488 350 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 ARMCX5Q6P1M9 558 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 SH2D3AQ9BRG2 576 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 WDR11Q9BZH6 1224 aa14.69□□□□□ -0.06
NBPF3-201ENST00000318220 PABPN1LA6NDY0 278 aaKnown RBP14.68□□□□□ -0.06
NBPF3-201ENST00000318220 ANO6Q4KMQ2 910 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 RSRC2Q7L4I2 434 aaKnown RBP14.68□□□□□ -0.06
NBPF3-201ENST00000318220 THNSL1Q8IYQ7 743 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 NACC1Q96RE7 527 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 KCNG1Q9UIX4 513 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 ZMYM6O95789 1325 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 GSG1L2A8MUP6 293 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.68□□□□□ -0.06
NBPF3-201ENST00000318220 NOX5Q96PH1 765 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 ABCB11O95342 1321 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 DAPK3O43293 454 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
NBPF3-201ENST00000318220 ZBTB5O15062 677 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 TFAMQ00059 246 aaKnown RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 FBXO33Q7Z6M2 555 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 CEP57Q86XR8 500 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 OR6J1Q8NGC5 347 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 KIF28PB7ZC32 967 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 TLR3O15455 904 aaKnown RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 TBC1D10CQ8IV04 446 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 CCDC50Q8IVM0 306 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 RIOK1Q9BRS2 568 aaKnown RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 NOC4LQ9BVI4 516 aaKnown RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 MTX1Q13505 466 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 CTTNQ14247 550 aaKnown RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 ACER1Q8TDN7 264 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 FRMPD1Q5SYB0 1578 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 SYNJ2BP-COX16A0A087WUM0 186 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 ASB14A6NK59 587 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 AXDND1Q5T1B0 1012 aaPredicted RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 RNF26Q9BY78 433 aaPredicted RBP14.67□□□□□ -0.06
NBPF3-201ENST00000318220 TM6SF1Q9BZW5 370 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 COX16Q9P0S2 106 aa14.67□□□□□ -0.06
NBPF3-201ENST00000318220 CAPN9O14815 690 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 PSAPP07602 524 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 FAM193AP78312 1265 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 KARSQ15046 597 aaKnown RBP14.66□□□□□ -0.06
NBPF3-201ENST00000318220 C12orf60Q5U649 245 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 PLA2G12BQ9BX93 195 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 CTNND2Q9UQB3 1225 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 MYBP10242 640 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 PAFAH1B1P43034 410 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 MRPS9P82933 396 aaKnown RBP14.66□□□□□ -0.06
NBPF3-201ENST00000318220 DCAF4Q8WV16 495 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 CCDC113Q9H0I3 377 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.66□□□□□ -0.06
NBPF3-201ENST00000318220 CTNND1O60716 968 aaKnown RBP14.66□□□□□ -0.06
NBPF3-201ENST00000318220 TNNC2P02585 160 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 RABL6Q3YEC7 729 aaPredicted RBP14.66□□□□□ -0.06
NBPF3-201ENST00000318220 EXOC8Q8IYI6 725 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 NEDD1Q8NHV4 660 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 PIGOQ8TEQ8 1089 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 IWS1Q96ST2 819 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
NBPF3-201ENST00000318220 RNASE9P60153 205 aaKnown RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SCRN1Q12765 414 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SCYL3Q8IZE3 742 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 STAG1Q8WVM7 1258 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 KMT5AQ9NQR1 393 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 GJB4Q9NTQ9 266 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 ARGLU1Q9NWB6 273 aaPredicted RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 PCDHA6Q9UN73 950 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 ATP11BQ9Y2G3 1177 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 PCDHA8Q9Y5H6 950 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 BCL9O00512 1426 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CALUO43852 315 aaPredicted RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 NEDD9Q14511 834 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 PPP2R5AQ15172 486 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SLC10A5Q5PT55 438 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 INTS4Q96HW7 963 aaKnown RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CCDC42Q96M95 316 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CLIC6Q96NY7 704 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 VCPKMTQ9H867 229 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 KIF5CO60282 957 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 GGPS1O95749 300 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 PSMC4P43686 418 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SWSAP1Q6NVH7 229 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 TTC30AQ86WT1 665 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 ENAHQ8N8S7 591 aaPredicted RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CDCA5Q96FF9 252 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 LSG1Q9H089 658 aaKnown RBP14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SLC39A2Q9NP94 309 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 SSX2IPQ9Y2D8 614 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 COL4A3BPQ9Y5P4 624 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 TNS2Q63HR2 1409 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 ELP1O95163 1332 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 K7ERI5 159 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CYP2C8P10632 490 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 TMEM62Q0P6H9 643 aa14.65□□□□□ -0.06
NBPF3-201ENST00000318220 CYP4F22Q6NT55 531 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms