RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 LCMT1Q9UIC8 334 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 L1RE1Q9UN81 338 aa17.9■□□□□ 0.46
USH1C-202ENST00000318024 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 PALM3A6NDB9 673 aaPredicted RBP17.89■□□□□ 0.45
USH1C-202ENST00000318024 FZD9O00144 591 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 ACTN4O43707 911 aaKnown RBP17.89■□□□□ 0.45
USH1C-202ENST00000318024 PARP1P09874 1014 aaKnown RBP17.89■□□□□ 0.45
USH1C-202ENST00000318024 CCDC175P0C221 793 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 NOVP48745 357 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 JAG1P78504 1218 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 SAFBQ15424 915 aaKnown RBP eCLIP17.89■□□□□ 0.45
USH1C-202ENST00000318024 MIGA2Q7L4E1 593 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 MICALL2Q8IY33 904 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
USH1C-202ENST00000318024 PNKPQ96T60 521 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 UBA5Q9GZZ9 404 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 SERTAD1Q9UHV2 236 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 ZNF541Q9H0D2 1346 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 CNTNAP1P78357 1384 aa17.89■□□□□ 0.45
USH1C-202ENST00000318024 AKR1B15C9JRZ8 316 aaPredicted RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 TEX33O43247 280 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 SEPT2Q15019 361 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 TATDN1Q6P1N9 297 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 NOSTRINQ8IVI9 506 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 ZNF579Q8NAF0 562 aaKnown RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.88■□□□□ 0.45
USH1C-202ENST00000318024 PSME4Q14997 1843 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 ASTN2O75129 1339 aaPredicted RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 PLIN4Q96Q06 1357 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 SCG2P13521 617 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 ERCC5P28715 1186 aaPredicted RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 FAM151AQ8WW52 585 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 NAA15Q9BXJ9 866 aaKnown RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 DACH1Q9UI36 760 aa17.88■□□□□ 0.45
USH1C-202ENST00000318024 CNOT7Q9UIV1 285 aaKnown RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 HOOK1Q9UJC3 728 aaKnown RBP17.88■□□□□ 0.45
USH1C-202ENST00000318024 ATRNL1Q5VV63 1379 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 POLR2DO15514 142 aaKnown RBP17.87■□□□□ 0.45
USH1C-202ENST00000318024 RPS6KA5O75582 802 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 PDHBP11177 359 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 XBP1P17861 261 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 ACTN2P35609 894 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 MTMR14Q8NCE2 650 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 CCDC17Q96LX7 622 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 SYT17Q9BSW7 474 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 MYO1CO00159 1063 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 ADAMTS3O15072 1205 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
USH1C-202ENST00000318024 ATP2B1P20020 1258 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 TUBB2AQ13885 445 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 PFKFB3Q16875 520 aaPredicted RBP17.87■□□□□ 0.45
USH1C-202ENST00000318024 CEP112Q8N8E3 955 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
USH1C-202ENST00000318024 TUBB2BQ9BVA1 445 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 PHF20Q9BVI0 1012 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 PDE11AQ9HCR9 933 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 GPCPD1Q9NPB8 672 aa17.87■□□□□ 0.45
USH1C-202ENST00000318024 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 GH2P01242 217 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 GNAQP50148 359 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 ABCB5Q2M3G0 1257 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 CT47A1Q5JQC4 288 aaPredicted RBP17.86■□□□□ 0.45
USH1C-202ENST00000318024 SRLQ86TD4 932 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 GRAMD1CQ8IYS0 662 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 ADD3Q9UEY8 706 aaKnown RBP17.86■□□□□ 0.45
USH1C-202ENST00000318024 FAM205CA6NFA0 338 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 RBL2Q08999 1139 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 CUL4BQ13620 913 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 EARS2Q5JPH6 523 aaKnown RBP17.86■□□□□ 0.45
USH1C-202ENST00000318024 CDKAL1Q5VV42 579 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 CABP5Q9NP86 173 aa17.86■□□□□ 0.45
USH1C-202ENST00000318024 SIPA1L1O43166 1804 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 LMAN1P49257 510 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 NLRP5P59047 1200 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 ZNF280AP59817 542 aaPredicted RBP17.85■□□□□ 0.45
USH1C-202ENST00000318024 NOM1Q5C9Z4 860 aaKnown RBP17.85■□□□□ 0.45
USH1C-202ENST00000318024 HDXQ7Z353 690 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 FOXP1Q9H334 677 aaPredicted RBP17.85■□□□□ 0.45
USH1C-202ENST00000318024 ZSWIM4Q9H7M6 989 aa17.85■□□□□ 0.45
USH1C-202ENST00000318024 SRPRBQ9Y5M8 271 aaKnown RBP17.85■□□□□ 0.45
USH1C-202ENST00000318024 TRIM66O15016 1216 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 RPS12P25398 132 aaKnown RBP17.84■□□□□ 0.45
USH1C-202ENST00000318024 TUBB4BP68371 445 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 TYW1BQ6NUM6 668 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 KCTD1Q719H9 257 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 ABCB6Q9NP58 842 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 LZTFL1Q9NQ48 299 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.84■□□□□ 0.45
USH1C-202ENST00000318024 MFAP3LO75121 409 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 ICA1Q05084 483 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 RASA3Q14644 834 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 NPY5RQ15761 445 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 TTBK2Q6IQ55 1244 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 USP49Q70CQ1 688 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 SH3RF1Q7Z6J0 888 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 KANSL2Q9H9L4 492 aa17.84■□□□□ 0.45
USH1C-202ENST00000318024 CWC15Q9P013 229 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms