RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 USH1GQ495M9 461 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 GPR142Q7Z601 462 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 CCDC148Q8NFR7 591 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 PIBF1Q8WXW3 757 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 ABHD8Q96I13 439 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 EFCC1Q9HA90 598 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 SH3GLB2Q9NR46 395 aa17.69■□□□□ 0.42
HNF4A-202ENST00000316673 MAP3K20Q9NYL2 800 aaKnown RBP17.69■□□□□ 0.42
HNF4A-202ENST00000316673 PEX10O60683 326 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 CALML3P27482 149 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 PRMT2P55345 433 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 KRT40Q6A162 431 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 GLT8D2Q9H1C3 349 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 HOMER2Q9NSB8 354 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 SLC5A4Q9NY91 659 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 RIPK3Q9Y572 518 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 PFASO15067 1338 aa17.68■□□□□ 0.42
HNF4A-202ENST00000316673 SLC15A5A6NIM6 579 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 HEATR3Q7Z4Q2 680 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 FERMT3Q86UX7 667 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 CD99L2Q8TCZ2 262 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 BARHL2Q9NY43 387 aa17.67■□□□□ 0.42
HNF4A-202ENST00000316673 PPP1R11O60927 126 aaPredicted RBP17.66■□□□□ 0.42
HNF4A-202ENST00000316673 PTPREP23469 700 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 FOSBP53539 338 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 RESTQ13127 1097 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 ANKRD35Q8N283 1001 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 MMP19Q99542 508 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
HNF4A-202ENST00000316673 MGAMO43451 1857 aa17.66■□□□□ 0.42
HNF4A-202ENST00000316673 hCG_1642624A0A1W2PR95 340 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 PPFIA3O75145 1194 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 MBD3O95983 291 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 MMP1P03956 469 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 NAPAP54920 295 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 GUCY1B3Q02153 619 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 GRB14Q14449 540 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 PKN1Q16512 942 aa17.65■□□□□ 0.42
HNF4A-202ENST00000316673 GHRHRQ02643 423 aa17.64■□□□□ 0.41
HNF4A-202ENST00000316673 WWC2Q6AWC2 1192 aa17.64■□□□□ 0.41
HNF4A-202ENST00000316673 TMEM87AQ8NBN3 555 aa17.64■□□□□ 0.41
HNF4A-202ENST00000316673 CLEC4DQ8WXI8 215 aa17.64■□□□□ 0.41
HNF4A-202ENST00000316673 CUL5Q93034 780 aa17.64■□□□□ 0.41
HNF4A-202ENST00000316673 ESYT2A0FGR8 921 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 GNA11P29992 359 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 KRT2P35908 639 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 RGS2P41220 211 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 MRPL12P52815 198 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 MUM1L1Q5H9M0 696 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 MORN1Q5T089 497 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 RNF207Q6ZRF8 634 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 GPKOWQ92917 476 aaPredicted RBP eCLIP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 ARHGAP39Q9C0H5 1083 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 PSTPIP2Q9H939 334 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 A1CFQ9NQ94 594 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 SRRDQ9UH36 339 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 ZNF236Q9UL36 1845 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 SMCHD1A6NHR9 2005 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 ELP1O95163 1332 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 GOLGA6L4A6NEF3 574 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 STXBP3O00186 592 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 NFIBO00712 420 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 HOXC6P09630 235 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 XRCC5P13010 732 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 U2AF2P26368 475 aaKnown RBP eCLIP17.63■□□□□ 0.411e-26■□□□□ 8.9
HNF4A-202ENST00000316673 ADORA2AP29274 412 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 NLRP5P59047 1200 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 DNM1Q05193 864 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 MCTP2Q6DN12 878 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 DPP9Q86TI2 863 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 BICD2Q8TD16 824 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 C6orf50Q9HD87 102 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
HNF4A-202ENST00000316673 DIS3Q9Y2L1 958 aaKnown RBP17.63■□□□□ 0.41
HNF4A-202ENST00000316673 PLXNB2O15031 1838 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 CASP8AP2Q9UKL3 1982 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 GCOM1H8Y6P7 765 aaPredicted RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 DTNBO60941 627 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 PRPF40AO75400 957 aaKnown RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 POLR2MP0CAP2 368 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 CTGFP29279 349 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 ADCY7P51828 1080 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 IRF5Q13568 498 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 PKN2Q16513 984 aaKnown RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 DIS3L2Q8IYB7 885 aaKnown RBP17.62■□□□□ 0.41
HNF4A-202ENST00000316673 SPATA32Q96LK8 384 aa17.62■□□□□ 0.41
HNF4A-202ENST00000316673 MPHOSPH6Q99547 160 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms