RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CYB5R4Q7L1T6 521 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 IQCGQ9H095 443 aaKnown RBP14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ALDH8A1Q9H2A2 487 aaPredicted RBP14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 AGTPBP1Q9UPW5 1226 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 PRPF6O94906 941 aaKnown RBP14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 KRT19P08727 400 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 P4HA1P13674 534 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ADAM9Q13443 819 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 SF3B3Q15393 1217 aaKnown RBP14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 CLUL1Q15846 466 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 GBP6Q6ZN66 633 aa14.16□□□□□ -0.14
SH3PXD2A-201ENST00000315994 CSF1RP07333 972 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 METTL13Q8N6R0 699 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ATP6V0A1Q93050 837 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 PGBD1Q96JS3 809 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 IFIH1Q9BYX4 1025 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 UTYO14607 1347 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 FER1L4A9Z1Z3 1794 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ATP2A2P16615 1042 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 RNF187Q5TA31 235 aaPredicted RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 SREK1Q8WXA9 508 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 DHTKD1Q96HY7 919 aaPredicted RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 FTOQ9C0B1 505 aaKnown RBP eCLIP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 GAP43P17677 238 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 STAT1P42224 750 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ARHGAP44Q17R89 818 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ARL6IP4Q66PJ3 421 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 MIGA2Q7L4E1 593 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ARMC9Q7Z3E5 817 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 HACE1Q8IYU2 909 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 ADD3Q9UEY8 706 aaKnown RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 IKBKBO14920 756 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 POLGP54098 1239 aaPredicted RBP14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 C8orf74Q6P047 294 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 REREQ9P2R6 1566 aa14.15□□□□□ -0.14
SH3PXD2A-201ENST00000315994 HOXA7P31268 230 aaPredicted RBP14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 PPP1R14CQ8TAE6 165 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 AIFM3Q96NN9 605 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 IGSF3O75054 1194 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 GTF2F1P35269 517 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■■■■□ 24.1
SH3PXD2A-201ENST00000315994 ASNSP08243 561 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CCND2P30279 289 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 DHX37Q8IY37 1157 aaKnown RBP14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 LINC00116Q8NCU8 138 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CDHR1Q96JP9 859 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 GSG1L2A8MUP6 293 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 UBXN2AP68543 259 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 TSGA10IPQ3SY00 556 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ZNF658Q5TYW1 1059 aaPredicted RBP14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 NSRP1Q9H0G5 558 aaKnown RBP14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 LY9Q9HBG7 655 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 SUGT1Q9Y2Z0 365 aa14.14□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CDC25BP30305 580 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 IREB2P48200 963 aaKnown RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 AOC3Q16853 763 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 LONRF3Q496Y0 759 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ARMCX5Q6P1M9 558 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CEP128Q6ZU80 1094 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 HDXQ7Z353 690 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ZNF512BQ96KM6 892 aaPredicted RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 SORBS3O60504 671 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ODR4Q5SWX8 454 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CRAMP1Q96RY5 1269 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 COPB1P53618 953 aaKnown RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 GH2P01242 217 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CD19P15391 556 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 LRMPQ12912 555 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 PDIA6Q15084 440 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 PFKFB3Q16875 520 aaPredicted RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 C17orf53Q8N3J3 647 aaPredicted RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 WDR70Q9NW82 654 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ARHGEF28Q8N1W1 1705 aaKnown RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 AP3B2Q13367 1082 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 SCARF1Q14162 830 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 DCUN1D2Q6PH85 259 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ENAHQ8N8S7 591 aaPredicted RBP14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 NACC1Q96RE7 527 aa14.13□□□□□ -0.15
SH3PXD2A-201ENST00000315994 EEF1GP26641 437 aaKnown RBP14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 HSPA1LP34931 641 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 SEPT2Q15019 361 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 UBE2SQ16763 222 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 UTP14CQ5TAP6 766 aaKnown RBP14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CNOT6LQ96LI5 555 aaKnown RBP14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CNTNAP4Q9C0A0 1308 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 RIC8AQ9NPQ8 531 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 MRPS9P82933 396 aaKnown RBP14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 PPP2R5AQ15172 486 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 MAN1B1Q9UKM7 699 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 ACTN4O43707 911 aaKnown RBP14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 TMOD1P28289 359 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CACNB3P54284 484 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 RPS6KA1Q15418 735 aa14.12□□□□□ -0.15
SH3PXD2A-201ENST00000315994 CFAP58Q5T655 872 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms