RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 GABPAQ06546 454 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 BRD3Q15059 726 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 MEA1Q16626 185 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 WHAMMP3Q1A5X7 153 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 KIAA0895Q8NCT3 520 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 MSANTD4Q8NCY6 345 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 TBC1D22AQ8WUA7 517 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 EEF2KMTQ96G04 330 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 FUT8Q9BYC5 575 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 ARFGAP3Q9NP61 516 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 BLOC1S4Q9NUP1 217 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 MTMR4Q9NYA4 1195 aa17.03■□□□□ 0.32
SPIRE1-201ENST00000309836 BICDL2A1A5D9 508 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 SLC37A4O43826 429 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 BBOX1O75936 387 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 AKR1B1P15121 316 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 HOXA10P31260 410 aaPredicted RBP17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 COBLL1Q53SF7 1204 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 MIIPQ5JXC2 388 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 CLEC10AQ8IUN9 316 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 COA7Q96BR5 231 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 PNKPQ96T60 521 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 SEMA6BQ9H3T3 888 aa17.02■□□□□ 0.32
SPIRE1-201ENST00000309836 CCDC151A5D8V7 595 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 hCG_1984214I3L0E3 225 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 SNHG28P0DPA3 235 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 TXKP42681 527 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 ADCY7P51828 1080 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 DDR1Q08345 913 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 CALCRLQ16602 461 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 LONRF2Q1L5Z9 754 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 ZNF713Q8N859 430 aaPredicted RBP17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 CALML4Q96GE6 196 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 AGPAT5Q9NUQ2 364 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 RAB21Q9UL25 225 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 TFR2Q9UP52 801 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 MYMKA6NI61 221 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 TDP2O95551 362 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 AMPD3Q01432 767 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 DPP8Q6V1X1 898 aaPredicted RBP17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 FAM114A1Q8IWE2 563 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 DDX4Q9NQI0 724 aaKnown RBP17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 GUCA1BQ9UMX6 200 aa17.01■□□□□ 0.31
SPIRE1-201ENST00000309836 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 C6orf229H3BNL8 230 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 POTEB2H3BUK9 544 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 MTIF2P46199 727 aaKnown RBP17■□□□□ 0.31
SPIRE1-201ENST00000309836 FAM193AP78312 1265 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 GTF2IP78347 998 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 TBC1D8BQ0IIM8 1120 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 PICALMQ13492 652 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 MCM6Q14566 821 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 CNNM4Q6P4Q7 775 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 ZSCAN29Q8IWY8 852 aaPredicted RBP17■□□□□ 0.31
SPIRE1-201ENST00000309836 CRAMP1Q96RY5 1269 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 SLC39A2Q9NP94 309 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 GPCPD1Q9NPB8 672 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 MYO6Q9UM54 1294 aa17■□□□□ 0.31
SPIRE1-201ENST00000309836 PSMD14O00487 310 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 PPP1R2P41236 205 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 EIF6P56537 245 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 SV2BQ7L1I2 683 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 NUP58Q9BVL2 599 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 HAUS4Q9H6D7 363 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 LRWD1Q9UFC0 647 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 ADAMTSL1Q8N6G6 1762 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 PPP1R11O60927 126 aaPredicted RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 OAS2P29728 719 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 ZBED6P86452 979 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 TSR1Q2NL82 804 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 CENPPQ6IPU0 288 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 ZNF662Q6ZS27 426 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 TRAPPC11Q7Z392 1133 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 RETREG2Q8NC44 543 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 HNRNPLLQ8WVV9 542 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 ERGIC2Q96RQ1 377 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 NUDT12Q9BQG2 462 aa16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 NOC4LQ9BVI4 516 aaKnown RBP16.99■□□□□ 0.31
SPIRE1-201ENST00000309836 CTAGE15A4D2H0 777 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 RCCD1A6NED2 376 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 UBAP1LF5GYI3 381 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 MAP2K7O14733 419 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 POLR3GO15318 223 aaPredicted RBP16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 CTAGE8P0CG41 777 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 SMC1AQ14683 1233 aaKnown RBP16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 TMEM119Q4V9L6 283 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 BEND6Q5SZJ8 279 aaPredicted RBP16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 UNC13DQ70J99 1090 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 CTAGE6Q86UF2 777 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 CTAGE4Q8IX94 777 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 CERS5Q8N5B7 392 aa16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 NOA1Q8NC60 698 aaKnown RBP16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 GJD4Q96KN9 370 aaPredicted RBP16.98■□□□□ 0.31
SPIRE1-201ENST00000309836 JMJD4Q9H9V9 463 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms