RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 LRRD1A4D1F6 860 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 EEF2P13639 858 aaKnown RBP10.24□□□□□ -0.77
XCR1-201ENST00000309285 C3orf67Q6ZVT6 689 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 OXER1Q8TDS5 423 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 TBC1D22AQ8WUA7 517 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 SPTLC3Q9NUV7 552 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 IKBKGQ9Y6K9 419 aa10.24□□□□□ -0.77
XCR1-201ENST00000309285 KLRK1P26718 216 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 RNASE9P60153 205 aaKnown RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 LRRC23Q53EV4 343 aaPredicted RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 ZNF365Q70YC5 407 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 PSMB7Q99436 277 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 TRIM7Q9C029 511 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 USH1CQ9Y6N9 552 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 TMEM110-MUSTN1A8MSY1 372 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 KLRF2D3W0D1 207 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 CASQ2O14958 399 aaPredicted RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 RNF40O75150 1001 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 MRC1P22897 1456 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 ZNF142P52746 1687 aaPredicted RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 TUBB2AQ13885 445 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 USP37Q86T82 979 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 CNGA4Q8IV77 575 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 PPP1R14CQ8TAE6 165 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 RASGRP4Q8TDF6 673 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 NSUN4Q96CB9 384 aaKnown RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 TUBB2BQ9BVA1 445 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 FAM13AO94988 1023 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 SH3BGRP55822 239 aaPredicted RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 RABGGTAQ92696 567 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 SMC6Q96SB8 1091 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 BLZF1Q9H2G9 400 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 TTF2Q9UNY4 1162 aaKnown RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 DOK7Q18PE1 504 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 RASIP1Q5U651 963 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 BLIDQ8IZY5 108 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 PPP1R13BQ96KQ4 1090 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 FERMT1Q9BQL6 677 aa10.23□□□□□ -0.77
XCR1-201ENST00000309285 NUCKS1Q9H1E3 243 aaKnown RBP10.23□□□□□ -0.77
XCR1-201ENST00000309285 KDM3BQ7LBC6 1761 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SCNN1DP51172 638 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 ADKP55263 362 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 PTPN21Q16825 1174 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SH2D4BQ5SQS7 431 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 RAB3IL1Q8TBN0 382 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 CCT6AP40227 531 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 TPD52P55327 224 aaPredicted RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 ARID5BQ14865 1188 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 RNF10Q8N5U6 811 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 PABPN1LA6NDY0 278 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 CHMP2AO43633 222 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 HIP1RO75146 1068 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 PPFIA4O75335 1185 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 MAP3K7CLP57077 242 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 UBXN1Q04323 297 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SPAG1Q07617 926 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 TCP10Q12799 353 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 INF2Q27J81 1249 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 VSIG1Q86XK7 387 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SAAL1Q96ER3 474 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 DDX27Q96GQ7 796 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 PARD6BQ9BYG5 372 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 TNS2Q63HR2 1409 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 APBA3O96018 575 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 ATP1A3P13637 1013 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 POLE2P56282 527 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 KCTD16Q68DU8 428 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SRLQ86TD4 932 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 CPXCR1Q8N123 301 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 SH3RF3Q8TEJ3 882 aaPredicted RBP10.22□□□□□ -0.77
XCR1-201ENST00000309285 TCP11Q8WWU5 503 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 EPSTI1Q96J88 318 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 FUCA2Q9BTY2 467 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 AFF2P51816 1311 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 STK36Q9NRP7 1315 aa10.22□□□□□ -0.77
XCR1-201ENST00000309285 CDC25AP30304 524 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 SHC4Q6S5L8 630 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 PPP2R2CQ9Y2T4 447 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 CCNT1O60563 726 aaKnown RBP10.21□□□□□ -0.77
XCR1-201ENST00000309285 BBOX1O75936 387 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 CYP2C19P33261 490 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 SPATS2Q86XZ4 545 aaKnown RBP10.21□□□□□ -0.77
XCR1-201ENST00000309285 CCDC110Q8TBZ0 833 aa10.21□□□□□ -0.77
XCR1-201ENST00000309285 ARHGEF2Q92974 986 aaKnown RBP10.21□□□□□ -0.77
XCR1-201ENST00000309285 STMN4Q9H169 189 aaPredicted RBP10.21□□□□□ -0.77
XCR1-201ENST00000309285 RIC1Q4ADV7 1423 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 TAF12Q16514 161 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.78
XCR1-201ENST00000309285 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 ADGRA1Q86SQ6 560 aa10.21□□□□□ -0.78
XCR1-201ENST00000309285 SELENOOQ9BVL4 669 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms