RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TESPA1A2RU30 521 aaPredicted RBP9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 SPDYE16A6NNV3 312 aaPredicted RBP9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 SCP2P22307 547 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 UBXN1Q04323 297 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 SPDYE2Q495Y8 402 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 ISM2Q6H9L7 571 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 CACTINQ8WUQ7 758 aaKnown RBP9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 EXOC4Q96A65 974 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 DDX25Q9UHL0 483 aaKnown RBP9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 AXIN2Q9Y2T1 843 aa9.15□□□□□ -0.94
PCDHB1-201ENST00000306549 PTGS1P23219 599 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 POLGP54098 1239 aaPredicted RBP9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF365Q70YC5 407 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 TRIML1Q8N9V2 468 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP2R3CQ969Q6 453 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 ATP8B3O60423 1300 aa9.15□□□□□ -0.95
PCDHB1-201ENST00000306549 SLC26A4O43511 780 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TNFAIP3P21580 790 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 POLR2BP30876 1174 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TMEM232C9JQI7 657 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 DIS3L2Q8IYB7 885 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 ARHGAP24Q8N264 748 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 DHX58Q96C10 678 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 USP42Q9H9J4 1324 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PLSCR1O15162 318 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PPFIA2O75334 1257 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 KRT10P13645 584 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PDZD4Q76G19 769 aaPredicted RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 NBPF11Q86T75 865 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 CACNA2D3Q8IZS8 1091 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 MROH7-TTC4A0A0A0MT08 1334 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 MARCKSP29966 332 aaPredicted RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 JAK3P52333 1124 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 FAM47CQ5HY64 1035 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 COL5A2P05997 1499 aaPredicted RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF233A6NK53 670 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TRAF5O00463 557 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 NFIXQ14938 502 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 KYAT1Q16773 422 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 SYDE2Q5VT97 1194 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 DCUN1D2Q6PH85 259 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 KLHDC4Q8TBB5 520 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 IFT122Q9HBG6 1241 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 SRP68Q9UHB9 627 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 KCNH3Q9ULD8 1083 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 UTYO14607 1347 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 MYH7P12883 1935 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PNMA6FA0A0J9YX94 578 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 USP17L10C9JJH3 530 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 POLA2Q14181 598 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 NEDD9Q14511 834 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PIK3AP1Q6ZUJ8 805 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 XPAP23025 273 aaPredicted RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 SNAPC2Q13487 334 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TUBB2AQ13885 445 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 ALX1Q15699 326 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 FAM227BQ96M60 508 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 PARK7Q99497 189 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 TUBB2BQ9BVA1 445 aa9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
PCDHB1-201ENST00000306549 I3L4J1 428 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 TNNC2P02585 160 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 PPP2R5EQ16537 467 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 METTL13Q8N6R0 699 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 IPO11Q9UI26 975 aaKnown RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 OR52Z1P0C646 297 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 MECOMQ03112 1051 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 RPS6KA2Q15349 733 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 TKFCQ3LXA3 575 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 HHIPL2Q6UWX4 724 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 NOSTRINQ8IVI9 506 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 LUC7L2Q9Y383 392 aaKnown RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 ZNF521Q96K83 1311 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 CARNS1A5YM72 827 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 LRRC24Q50LG9 513 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 MYCT1Q8N699 235 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 GPBP1L1Q9HC44 474 aaPredicted RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 ZSCAN20P17040 1043 aaPredicted RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 TNNQ9UQP3 1299 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 F8W8V4 182 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 NFKBIAP25963 317 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 PRKG1Q13976 671 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 LRCH2Q5VUJ6 765 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 KDM4FA0A1W2PPD8 638 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 ADCY5O95622 1261 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 ALDH1A1P00352 501 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 KRT3P12035 628 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 GTF2F1P35269 517 aaKnown RBP eCLIP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 CDC37Q16543 378 aaPredicted RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 NCAPH2Q6IBW4 605 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 IPO4Q8TEX9 1081 aaKnown RBP9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 HAUS1Q96CS2 278 aa9.13□□□□□ -0.95
PCDHB1-201ENST00000306549 ENTPD3O75355 529 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms