RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SPTLC3Q9NUV7 552 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 CLIP2Q9UDT6 1046 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 RCOR1Q9UKL0 485 aa9□□□□□ -0.97
TM4SF1-201ENST00000305366 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
TM4SF1-201ENST00000305366 LOC285556D6RIA3 1793 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 PTPDC1A2A3K4 754 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 VWA5AO00534 786 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 SEPT4O43236 478 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 OSBP2Q969R2 916 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 KIFC2Q96AC6 838 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 SIPA1L1O43166 1804 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 WDR19Q8NEZ3 1342 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 MGAMO43451 1857 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 PTPRFP10586 1907 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 DOCK3Q8IZD9 2030 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 GSG1L2A8MUP6 293 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 GOLGA6L6A8MZA4 724 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 M0R2C6 588 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 CTAGE5O15320 804 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 AP5Z1O43299 807 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 SLC25A27O95847 323 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 PDIA3P30101 505 aaKnown RBP8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 TDO2P48775 406 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 APOBRQ0VD83 1088 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 LRRC41Q15345 812 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 ZNF444Q8N0Y2 327 aaPredicted RBP8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 BICD2Q8TD16 824 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 APPBP2Q92624 585 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 BADQ92934 168 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 DDX11Q96FC9 970 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 XPNPEP3Q9NQH7 507 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 MTMR10Q9NXD2 777 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 PPP1R9AQ9ULJ8 1098 aa8.99□□□□□ -0.97
TM4SF1-201ENST00000305366 F5H6K3 240 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 DYNC1I1O14576 645 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 FOXP2O15409 715 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 NR1I2O75469 434 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 RARBP10826 455 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 RASA1P20936 1047 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 KLRC3Q07444 240 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.979e-8■■■□□ 17
TM4SF1-201ENST00000305366 SHHQ15465 462 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 C9orf50Q5SZB4 431 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 SNRNP48Q6IEG0 339 aaKnown RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 RIOX2Q8IUF8 465 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 ZNF396Q96N95 335 aaPredicted RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 SLF1Q9BQI6 1058 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 TINF2Q9BSI4 451 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 LRRC2Q9BYS8 371 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 RAVER2Q9HCJ3 691 aaKnown RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 ARPP21Q9UBL0 812 aaPredicted RBP8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 LAMA3Q16787 3333 aa8.98□□□□□ -0.97
TM4SF1-201ENST00000305366 MYH15Q9Y2K3 1946 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 TRIM43BA6NCK2 446 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 GPAA1O43292 621 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 PQBP1O60828 265 aaKnown RBP8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 NDUFB10O96000 172 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 TLE2Q04725 743 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 IMMTQ16891 758 aaKnown RBP8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 ABRAQ8N0Z2 381 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 LRRC47Q8N1G4 583 aaKnown RBP8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 VTI1AQ96AJ9 217 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 TRIM43Q96BQ3 446 aaPredicted RBP8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 PRIMPOLQ96LW4 560 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 MAP7D2Q96T17 732 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 HOMER2Q9NSB8 354 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 ZHX1Q9UKY1 873 aaPredicted RBP8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 RIPK3Q9Y572 518 aa8.97□□□□□ -0.97
TM4SF1-201ENST00000305366 UQCRHLA0A096LP55 91 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 C19orf67A6NJJ6 358 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ZBED4O75132 1171 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 IGHA2P01877 340 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 UQCRHP07919 91 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 IKQ13123 557 aaPredicted RBP8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 CAMK4Q16566 473 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ZNF792Q3KQV3 632 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ANO6Q4KMQ2 910 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 RNF180Q86T96 592 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 MB21D2Q8IYB1 491 aaPredicted RBP8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 KIAA1524Q8TCG1 905 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 TTC12Q9H892 705 aaPredicted RBP8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ZNF214Q9UL59 606 aaPredicted RBP8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ADAMTS5Q9UNA0 930 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 MAST2Q6P0Q8 1798 aa8.96□□□□□ -0.97
TM4SF1-201ENST00000305366 ATAD5Q96QE3 1844 aa8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 DHX16O60231 1041 aaKnown RBP8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 FGAP02671 866 aa8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 SNAP25P60880 206 aa8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 SBK1Q52WX2 424 aa8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 GPR153Q6NV75 609 aa8.96□□□□□ -0.98
TM4SF1-201ENST00000305366 LUZP1Q86V48 1076 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms