RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 PRC1O43663 620 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 EVI5O60447 810 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 RARBP10826 455 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SMPD1P17405 629 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 BMP8BP34820 402 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ADCYAP1R1P41586 468 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 CDK7P50613 346 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 TRDNQ13061 729 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 NSMFQ6X4W1 530 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 RNF207Q6ZRF8 634 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SLC43A3Q8NBI5 491 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ARRDC4Q8NCT1 418 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 DNERQ8NFT8 737 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 DPF3Q92784 378 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SPZ1Q9BXG8 430 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SENP6Q9GZR1 1112 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 FAM184BQ9ULE4 1060 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 CNPY2Q9Y2B0 182 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 NID2Q14112 1375 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ABCB11O95342 1321 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 A0A1W2PQ45 241 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 A0A1W2PQY0 241 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 RGS20O76081 388 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 DDAH1O94760 285 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ITGB8P26012 769 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 SMARCA1P28370 1054 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 MCM5P33992 734 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 HSPA4P34932 840 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 WTAPQ15007 396 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 USH1GQ495M9 461 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 TMEM67Q5HYA8 995 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 RALYLQ86SE5 291 aaKnown RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 FBXO16Q8IX29 292 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 C7orf61Q8IZ16 206 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 FBXL16Q8N461 479 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
CLCC1-201ENST00000302500 FAM217BQ9NTX9 383 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 CTDP1Q9Y5B0 961 aaPredicted RBP13.13□□□□□ -0.31
CLCC1-201ENST00000302500 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 ARIH2O95376 493 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 PLEKHA8P1O95397 391 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 ACLYP53396 1101 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 RTP1P59025 263 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 CHRDL2Q6WN34 429 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 FBXO11Q86XK2 927 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 SRBD1Q8N5C6 995 aaKnown RBP13.12□□□□□ -0.31
CLCC1-201ENST00000302500 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 PIGSQ96S52 555 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 PDLIM7Q9NR12 457 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 BRPF3Q9ULD4 1205 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 ISY1Q9ULR0 285 aaKnown RBP13.12□□□□□ -0.31
CLCC1-201ENST00000302500 Q9Y3F1 56 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 NR2E3Q9Y5X4 410 aa13.12□□□□□ -0.31
CLCC1-201ENST00000302500 MYH7BA7E2Y1 1941 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 DOCK5Q9H7D0 1870 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 MOXD2PA6NHM9 499 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
CLCC1-201ENST00000302500 KCNA10Q16322 511 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 TRIM60Q495X7 471 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 DUSP28Q4G0W2 176 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 KIAA1211Q6ZU35 1233 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 AMNQ9BXJ7 453 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 ZMYND8Q9ULU4 1186 aaPredicted RBP13.11□□□□□ -0.31
CLCC1-201ENST00000302500 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
CLCC1-201ENST00000302500 CHD7Q9P2D1 2997 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 PNMA6FA0A0J9YX94 578 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 TRIM43BA6NCK2 446 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 ASGR1P07306 291 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 SYN1P17600 705 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 CALML3P27482 149 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
CLCC1-201ENST00000302500 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
CLCC1-201ENST00000302500 TNFAIP2Q03169 654 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 IQSEC1Q6DN90 963 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 APOA5Q6Q788 366 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 RNF180Q86T96 592 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 TRIM43Q96BQ3 446 aaPredicted RBP13.1□□□□□ -0.31
CLCC1-201ENST00000302500 IL17RAQ96F46 866 aa13.1□□□□□ -0.31
CLCC1-201ENST00000302500 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
CLCC1-201ENST00000302500 ELP1O95163 1332 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 RXRAP19793 462 aa13.09□□□□□ -0.31
CLCC1-201ENST00000302500 EVCP57679 992 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms