RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 PPP4CP60510 307 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 NONOQ15233 471 aaKnown RBP eCLIP18.2■□□□□ 0.5
OTUB1-201ENST00000301453 TMED8Q6PL24 325 aaPredicted RBP18.2■□□□□ 0.5
OTUB1-201ENST00000301453 RETREG2Q8NC44 543 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 ERGIC2Q96RQ1 377 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 NUP58Q9BVL2 599 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 SPZ1Q9BXG8 430 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 ZC3H4Q9UPT8 1303 aaKnown RBP18.2■□□□□ 0.5
OTUB1-201ENST00000301453 MYBL2P10244 700 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 ACTN2P35609 894 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 KRT25Q7Z3Z0 450 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 CCDC170Q8IYT3 715 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 GOLGA5Q8TBA6 731 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 SMCR8Q8TEV9 937 aaPredicted RBP18.2■□□□□ 0.5
OTUB1-201ENST00000301453 MAGEF1Q9HAY2 307 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 SLC39A2Q9NP94 309 aa18.2■□□□□ 0.5
OTUB1-201ENST00000301453 SNED1Q8TER0 1413 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 BICDL2A1A5D9 508 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 SYF2O95926 243 aaKnown RBP18.19■□□□□ 0.5
OTUB1-201ENST00000301453 NFIXQ14938 502 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 WDR66Q8TBY9 1149 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 TBCKQ8TEA7 893 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 PCMTD1Q96MG8 357 aaPredicted RBP18.19■□□□□ 0.5
OTUB1-201ENST00000301453 VAT1LQ9HCJ6 419 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 TMEM260Q9NX78 707 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 SBF2Q86WG5 1849 aa18.19■□□□□ 0.5
OTUB1-201ENST00000301453 EDIL3O43854 480 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 TPTE2Q6XPS3 522 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 BARGINQ6ZT62 677 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 NEK8Q86SG6 692 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 FAM71BQ8TC56 605 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 GDAP1L1Q96MZ0 367 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 BLOC1S4Q9NUP1 217 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 ZNHIT6Q9NWK9 470 aaKnown RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 CWC15Q9P013 229 aaKnown RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 ANKIB1Q9P2G1 1089 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 BIN2Q9UBW5 565 aaPredicted RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 LCMT1Q9UIC8 334 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 AHDC1Q5TGY3 1603 aaPredicted RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 CDK8P49336 464 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 GRB10Q13322 594 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 GSPT2Q8IYD1 628 aaKnown RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 PIGSQ96S52 555 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 LZTS2Q9BRK4 669 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 ARHGAP20Q9P2F6 1191 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 LRWD1Q9UFC0 647 aa18.18■□□□□ 0.5
OTUB1-201ENST00000301453 FEZ2Q9UHY8 353 aaPredicted RBP18.18■□□□□ 0.5
OTUB1-201ENST00000301453 NT5C2P49902 561 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 FIGNQ5HY92 759 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 CENPPQ6IPU0 288 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 GPIHBP1Q8IV16 184 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 EYA3Q99504 573 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 COL24A1Q17RW2 1714 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 MYMKA6NI61 221 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 RGL2O15211 777 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 BAG3O95817 575 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 VAV2P52735 878 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 CDK17Q00537 523 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 FOXR1Q6PIV2 292 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 PNMA5Q96PV4 448 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 HINFPQ9BQA5 517 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 UBA5Q9GZZ9 404 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 SIK3Q9Y2K2 1263 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 ZNF831Q5JPB2 1677 aa18.17■□□□□ 0.5
OTUB1-201ENST00000301453 TNRC6CQ9HCJ0 1690 aaKnown RBP18.17■□□□□ 0.5
OTUB1-201ENST00000301453 NUTM2BA6NNL0 878 aaPredicted RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 NUTM2EB1AL46 878 aaPredicted RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 IDEP14735 1019 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 TXKP42681 527 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 FAM114A1Q8IWE2 563 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 C6orf50Q9HD87 102 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 CAPN6Q9Y6Q1 641 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 TARSL2A2RTX5 802 aaKnown RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 GNPATO15228 680 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 AARSP49588 968 aaKnown RBP eCLIP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 C2orf54Q08AI8 447 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 COBLL1Q53SF7 1204 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 CCDC47Q96A33 483 aaKnown RBP18.16■□□□□ 0.5
OTUB1-201ENST00000301453 MTMR9Q96QG7 549 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 VIPAS39Q9H9C1 493 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 PLAGL2Q9UPG8 496 aa18.16■□□□□ 0.5
OTUB1-201ENST00000301453 DDX60LQ5H9U9 1706 aaKnown RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 ANO9A1A5B4 782 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 ZPR1O75312 459 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 PRPF6O94906 941 aaKnown RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 HNRNPH3P31942 346 aaKnown RBP18.15■□□□□ 0.5
OTUB1-201ENST00000301453 HSP90B2PQ58FF3 399 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 C16orf86Q6ZW13 317 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 CREG2Q8IUH2 290 aa18.15■□□□□ 0.5
OTUB1-201ENST00000301453 AMOTL1Q8IY63 956 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms