RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 SDR42E1Q8WUS8 393 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TCP11Q8WWU5 503 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CASKIN2Q8WXE0 1202 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 MTMR8Q96EF0 704 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 SGSM3Q96HU1 749 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TRIM6Q9C030 488 aaPredicted RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 MYH13Q9UKX3 1938 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TNKSO95271 1327 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 PLEKHG1Q9ULL1 1385 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 C21orf2O43822 256 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CLTAP09496 248 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 PKN1Q16512 942 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CFAP221Q4G0U5 840 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 LCORLQ8N3X6 602 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 FAXDC2Q96IV6 333 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CALR3Q96L12 384 aaKnown RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 CNNM2Q9H8M5 875 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 NLRC4Q9NPP4 1024 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.16□□□□□ -0.46
SNX20-201ENST00000300590 KDM6AO15550 1401 aaPredicted RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 DIP2AQ14689 1571 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 A0A1W2PQC6 194 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 GSG1L2A8MUP6 293 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 PPP1R12AO14974 1030 aaPredicted RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 EEF1GP26641 437 aaKnown RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 MAP2K1Q02750 393 aaPredicted RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 EHHADHQ08426 723 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 UBE3CQ15386 1083 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 UBLCP1Q8WVY7 318 aaPredicted RBP12.16□□□□□ -0.46
SNX20-201ENST00000300590 PIK3R5Q8WYR1 880 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 CAVIN3Q969G5 261 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TLR10Q9BXR5 811 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SNX20-201ENST00000300590 MSL1Q68DK7 614 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 CHADLQ6NUI6 762 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 PDS5AQ29RF7 1337 aaKnown RBP12.15□□□□□ -0.46
SNX20-201ENST00000300590 GCOM1H8Y6P7 765 aaPredicted RBP12.15□□□□□ -0.46
SNX20-201ENST00000300590 CYP27B1O15528 508 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 MYZAPP0CAP1 466 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 ITGA6P23229 1130 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 UBA7P41226 1012 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 MYO1EQ12965 1108 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
SNX20-201ENST00000300590 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 PHF20Q9BVI0 1012 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 GREM2Q9H772 168 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 NOVA2Q9UNW9 492 aaKnown RBP12.15□□□□□ -0.46
SNX20-201ENST00000300590 LEMD3Q9Y2U8 911 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 C4AP0C0L4 1744 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 C4BP0C0L5 1744 aa12.15□□□□□ -0.46
SNX20-201ENST00000300590 TSPOAP1O95153 1857 aa12.15□□□□□ -0.47
SNX20-201ENST00000300590 CTNNA1P35221 906 aaKnown RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 GCKP35557 465 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 SLC1A4P43007 532 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 ATP2C1P98194 919 aaPredicted RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 CHRNA2Q15822 529 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 HLFQ16534 295 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 CACNA2D3Q8IZS8 1091 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 NACAP1Q9BZK3 213 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 GOLPH3Q9H4A6 298 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 L3MBTL1Q9Y468 752 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 BUB1BO60566 1050 aaPredicted RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 FCER1AP12319 257 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 SCTRP47872 440 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 PDE4DQ08499 809 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 CACNA2D4Q7Z3S7 1137 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 YTHDF3Q7Z739 585 aaKnown RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 MDM1Q8TC05 714 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.14□□□□□ -0.47
SNX20-201ENST00000300590 NUP58Q9BVL2 599 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 RNF26Q9BY78 433 aaPredicted RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 LRRC53A6NM62 1247 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 MAP3K12Q12852 859 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
SNX20-201ENST00000300590 DUSP9Q99956 384 aaKnown RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 SOS2Q07890 1332 aaPredicted RBP12.14□□□□□ -0.47
SNX20-201ENST00000300590 SMIM23A6NLE4 172 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 DCDC2CA8MYV0 355 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 RAD51CO43502 376 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 CCNHP51946 323 aaPredicted RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 ANKRD20A8PQ5CZ79 823 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
SNX20-201ENST00000300590 WLSQ5T9L3 541 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 KLHDC7AQ5VTJ3 777 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 DNAAF5Q86Y56 855 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 HVCN1Q96D96 273 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 STAMBPL1Q96FJ0 436 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 NOX5Q96PH1 765 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 TTYH3Q9C0H2 523 aa12.13□□□□□ -0.47
SNX20-201ENST00000300590 GGT7Q9UJ14 662 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms