RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 GPR161Q8N6U8 529 aaKnown RBP7.42□□□□□ -1.22
DEFB1-201ENST00000297439 TBC1D16Q8TBP0 767 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 ZNF507Q8TCN5 953 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 TGFBRAP1Q8WUH2 860 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 NELFBQ8WX92 580 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 UBXN4Q92575 508 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 RABGGTAQ92696 567 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 RRP36Q96EU6 259 aaKnown RBP7.42□□□□□ -1.22
DEFB1-201ENST00000297439 DNAJC7Q99615 494 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 NAP1L4Q99733 375 aaKnown RBP7.42□□□□□ -1.22
DEFB1-201ENST00000297439 NUP58Q9BVL2 599 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 LRRC27Q9C0I9 530 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 GLT8D2Q9H1C3 349 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 EHD4Q9H223 541 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 ABHD10Q9NUJ1 306 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 CTNND2Q9UQB3 1225 aa7.42□□□□□ -1.22
DEFB1-201ENST00000297439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 PVALEFA0A1B0GWK0 134 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 USP17L3A6NCW0 530 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 USP17L4A6NCW7 530 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 KCNJ18B7U540 433 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 N4BP3O15049 544 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 KIF5CO60282 957 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 UFL1O94874 794 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 ZRANB2O95218 330 aaKnown RBP eCLIP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 SERPINB2P05120 415 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 VEGFAP15692 232 aaPredicted RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 GCFC2P16383 781 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 ZSCAN20P17040 1043 aaPredicted RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 CCNE1P24864 410 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 CASQ1P31415 396 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 PRCPP42785 496 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 DNM2P50570 870 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 ADKP55263 362 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 GNG11P61952 73 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 DMTNQ08495 405 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 RBL2Q08999 1139 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 KCNJ12Q14500 433 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 SEPT2Q15019 361 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 DIXDC1Q155Q3 683 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 GRIK5Q16478 980 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 MEA1Q16626 185 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 GPATCH4Q5T3I0 446 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 SOGA3Q5TF21 947 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 PPP4R3AQ6IN85 833 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 RAD9BQ6WBX8 426 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 TOGARAM2Q6ZUX3 1019 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 USP17L1Q7RTZ2 530 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 IRF2BP1Q8IU81 584 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 ZSCAN29Q8IWY8 852 aaPredicted RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 REXO1Q8N1G1 1221 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 MNS1Q8NEH6 495 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 GPKOWQ92917 476 aaPredicted RBP eCLIP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 MTMR8Q96EF0 704 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 DYNLL2Q96FJ2 89 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 MTMR9Q96QG7 549 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 KCNK17Q96T54 332 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 RAB34Q9BZG1 259 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 TRIM9Q9C026 710 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 TMEM60Q9H2L4 133 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 MTMR4Q9NYA4 1195 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 SEC63Q9UGP8 760 aaKnown RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 TRPC5Q9UL62 973 aaPredicted RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 SYNPO2Q9UMS6 1093 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 STX8Q9UNK0 236 aa7.41□□□□□ -1.22
DEFB1-201ENST00000297439 COL2A1P02458 1487 aaPredicted RBP7.41□□□□□ -1.22
DEFB1-201ENST00000297439 A0A1W2PQJ5 194 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 CCDC151A5D8V7 595 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 SMCO2A6NFE2 343 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 NPHP1O15259 732 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 URI1O94763 535 aaPredicted RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 KIF20AO95235 890 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 SRGNP10124 158 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 PDHBP11177 359 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HNRNPH3P31942 346 aaKnown RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 CASP14P31944 242 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 CLK2P49760 499 aaKnown RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 FXR1P51114 621 aaKnown RBP eCLIP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 NAPAP54920 295 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 KCNQ4P56696 695 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HDLBPQ00341 1268 aaKnown RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 PSMD2Q13200 908 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 NAA30Q147X3 362 aaPredicted RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 KARSQ15046 597 aaKnown RBP7.4□□□□□ -1.22
DEFB1-201ENST00000297439 INF2Q27J81 1249 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 ERCC6LQ2NKX8 1250 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 MFSD14BQ5SR56 506 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HYIQ5T013 277 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 MOXD1Q6UVY6 613 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HHIPL2Q6UWX4 724 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HEATR3Q7Z4Q2 680 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 CABP7Q86V35 215 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 MAPKAPK5Q8IW41 473 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 MB21D1Q8N884 522 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 CEP112Q8N8E3 955 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 OR8K1Q8NGG5 319 aa7.4□□□□□ -1.22
DEFB1-201ENST00000297439 HNRNPLLQ8WVV9 542 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms