RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 PFDN1O60925 122 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 UFL1O94874 794 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 CTSWP56202 376 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 MIER3Q7Z3K6 550 aa12.04□□□□□ -0.48
PBRM1-201ENST00000296302 SMYD4Q8IYR2 804 aaPredicted RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 RBM17Q96I25 401 aaKnown RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 NOP53Q9NZM5 478 aaKnown RBP12.04□□□□□ -0.48
PBRM1-201ENST00000296302 SART1O43290 800 aaKnown RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 MOCS3O95396 460 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 PLTPP55058 493 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 IFNAR1P17181 557 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 CCNE1P24864 410 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 FKBP3Q00688 224 aaKnown RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 PCDHA13Q9Y5I0 950 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 ERVK-7P63135 1459 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 ANO9A1A5B4 782 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 TNNI1P19237 187 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 GYS2P54840 703 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 BFSP1Q12934 665 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 MAPKAPK5Q8IW41 473 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 LARP4BQ92615 738 aaKnown RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 KLRF2D3W0D1 207 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 GAS7O60861 476 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 SERPINB6P35237 376 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 EIF4A3P38919 411 aaKnown RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 SLC12A2P55011 1212 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 HAUS1Q96CS2 278 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 PHF23Q9BUL5 403 aaPredicted RBP12.03□□□□□ -0.48
PBRM1-201ENST00000296302 ZNF148Q9UQR1 794 aa12.03□□□□□ -0.48
PBRM1-201ENST00000296302 CCDC93Q567U6 631 aa12.02□□□□□ -0.48
PBRM1-201ENST00000296302 RBM26Q5T8P6 1007 aaKnown RBP12.02□□□□□ -0.48
PBRM1-201ENST00000296302 TGFBRAP1Q8WUH2 860 aa12.02□□□□□ -0.48
PBRM1-201ENST00000296302 TEKT1Q969V4 418 aa12.02□□□□□ -0.48
PBRM1-201ENST00000296302 C1orf112Q9NSG2 853 aa12.02□□□□□ -0.48
PBRM1-201ENST00000296302 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.48
PBRM1-201ENST00000296302 CXCR5P32302 372 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 SEPT2Q15019 361 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 FAM178BQ8IXR5 827 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 GRAMD1CQ8IYS0 662 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 KCNQ3O43525 872 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 ECEL1O95672 775 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 SERPING1P05155 500 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 KCNA6P17658 529 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 AOC3Q16853 763 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 C6orf118Q5T5N4 469 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 PDCD7Q8N8D1 485 aaKnown RBP12.02□□□□□ -0.49
PBRM1-201ENST00000296302 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
PBRM1-201ENST00000296302 HVCN1Q96D96 273 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.49
PBRM1-201ENST00000296302 GGA1Q9UJY5 639 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 CD2APQ9Y5K6 639 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 ADGBQ8N7X0 1667 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 RASGRF2O14827 1237 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 ATF7P17544 494 aaPredicted RBP12.02□□□□□ -0.49
PBRM1-201ENST00000296302 KIF11P52732 1056 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 LRRC24Q50LG9 513 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 STK17AQ9UEE5 414 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
PBRM1-201ENST00000296302 CCDC188H7C350 402 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 COBLO75128 1261 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 FTCDO95954 541 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 PCCAP05165 728 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-201ENST00000296302 TCP11X2Q5H9J9 407 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 NLRP7Q8WX94 980 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 FMO2Q99518 471 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 SOS2Q07890 1332 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-201ENST00000296302 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 DDX39AO00148 427 aaKnown RBP12.01□□□□□ -0.49
PBRM1-201ENST00000296302 AFPP02771 609 aaKnown RBP12.01□□□□□ -0.49
PBRM1-201ENST00000296302 ADCY2Q08462 1091 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 KRT31Q15323 416 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 CAPN12Q6ZSI9 719 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 TOGARAM2Q6ZUX3 1019 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 CCDC125Q86Z20 511 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 EEF2KMTQ96G04 330 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 PAGE5Q96GU1 130 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 CFBP00751 764 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 PDCLQ13371 301 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 POLA2Q14181 598 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 MESDQ14696 234 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 RESP18Q5W5W9 173 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 MB21D1Q8N884 522 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 TFCP2L1Q9NZI6 479 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 MYO1FO00160 1098 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 SH2B2O14492 632 aaPredicted RBP12.01□□□□□ -0.49
PBRM1-201ENST00000296302 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 NR2F2P24468 414 aa12.01□□□□□ -0.49
PBRM1-201ENST00000296302 BPIFB4P59827 614 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms