RNA–Protein interactions for RNA: ENST00000294053.7

CLPB-201, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLPB, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-201ENST00000294053 CNBD1Q8NA66 436 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 MTA3Q9BTC8 594 aa13.43□□□□□ -0.26
CLPB-201ENST00000294053 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 BACH1O14867 736 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 LDHBP07195 334 aaKnown RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 SARSP49591 514 aaKnown RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 MEX3CQ5U5Q3 659 aaKnown RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 CABS1Q96KC9 395 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 ATP8A2Q9NTI2 1148 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 ORC4O43929 436 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 PRPF6O94906 941 aaKnown RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 RCAN1P53805 252 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 MORC3Q14149 939 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 TTC38Q5R3I4 469 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
CLPB-201ENST00000294053 ARL8AQ96BM9 186 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 CCDC88AQ3V6T2 1871 aa13.42□□□□□ -0.26
CLPB-201ENST00000294053 SEMA3EO15041 775 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 KRT14P02533 472 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 SCG2P13521 617 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 XBP1P17861 261 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 SEC24CP53992 1094 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 GPSM2P81274 684 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 CCDC181Q5TID7 509 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 PRR5LQ6MZQ0 368 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 ABHD10Q9NUJ1 306 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 EHD2Q9NZN4 543 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 BCCIPQ9P287 314 aaKnown RBP eCLIP13.41□□□□□ -0.26
CLPB-201ENST00000294053 ZNF831Q5JPB2 1677 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 GUCY1A3Q02108 690 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 DPYDQ12882 1025 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 C12orf60Q5U649 245 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 ANKRD13CQ8N6S4 541 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 PNMA1Q8ND90 353 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 NAA15Q9BXJ9 866 aaKnown RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 RBM28Q9NW13 759 aaKnown RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 ARPP21Q9UBL0 812 aaPredicted RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 CYTH3O43739 400 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 DDAH1O94760 285 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 GRAPQ13588 217 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 POTEDQ86YR6 584 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 GRAPLQ8TC17 118 aaPredicted RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 PAGE5Q96GU1 130 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 MTRQ99707 1265 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 MKNK2Q9HBH9 465 aa13.41□□□□□ -0.26
CLPB-201ENST00000294053 ADD3Q9UEY8 706 aaKnown RBP13.41□□□□□ -0.26
CLPB-201ENST00000294053 PP2D1A8MPX8 630 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 NDUFA10O95299 355 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 SLURP2P0DP57 97 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 KRT31Q15323 416 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 PLIN2Q99541 437 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 UFL1O94874 794 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 ARHGAP25P42331 645 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 APBA1Q02410 837 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 ZNF579Q8NAF0 562 aaKnown RBP13.4□□□□□ -0.26
CLPB-201ENST00000294053 CCDC114Q96M63 670 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 CEP131Q9UPN4 1083 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 LAMB1P07942 1786 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 NHSQ6T4R5 1651 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
CLPB-201ENST00000294053 ESYT3A0FGR9 886 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 AGPSO00116 658 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 HSF2BPO75031 334 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 MCM3P25205 808 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 NT5DC1Q5TFE4 455 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 LRRC1Q9BTT6 524 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 DONSONQ9NYP3 566 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 DMGDHQ9UI17 866 aaKnown RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 DLEC1Q9Y238 1755 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 EIF3HO15372 352 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLPB-201ENST00000294053 SKAP2O75563 359 aaPredicted RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 TUBBP07437 444 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 CCNI2Q6ZMN8 369 aaPredicted RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 LUC7L2Q9Y383 392 aaKnown RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 XDHP47989 1333 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 CALM1P0DP23 149 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 CALM2P0DP24 149 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 CALM3P0DP25 149 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 TUBB2AQ13885 445 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 NAA25Q14CX7 972 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 SWT1Q5T5J6 900 aaKnown RBP13.39□□□□□ -0.27
CLPB-201ENST00000294053 WDR93Q6P2C0 686 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
CLPB-201ENST00000294053 TUBB2BQ9BVA1 445 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms