RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 DPYSL4O14531 572 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 PLA2G6O60733 806 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 SNAI1O95863 264 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 PARP1P09874 1014 aaKnown RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 ZNF865P0CJ78 1059 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 FDX1P10109 184 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 CALML3P27482 149 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 RTP1P59025 263 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 LRRC41Q15345 812 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 TKFCQ3LXA3 575 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 FBXO16Q8IX29 292 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 TTC14Q96N46 770 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 VAT1LQ9HCJ6 419 aa11.43□□□□□ -0.58
CCDC58-201ENST00000291458 PRDM5Q9NQX1 630 aaPredicted RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 DIS3Q9Y2L1 958 aaKnown RBP11.43□□□□□ -0.58
CCDC58-201ENST00000291458 ASTN1O14525 1302 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 SYNRGQ9UMZ2 1314 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 MYADML2A6NDP7 307 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 SOWAHBA6NEL2 793 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 E7EWF7 191 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 IFIT3O14879 490 aaKnown RBP11.42□□□□□ -0.58
CCDC58-201ENST00000291458 ADCY6O43306 1168 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 SNHG28P0DPA3 235 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 COL6A1P12109 1028 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 ADCYAP1R1P41586 468 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 ACVR2BQ13705 512 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 BAATQ14032 418 aaPredicted RBP11.42□□□□□ -0.58
CCDC58-201ENST00000291458 CCDC178Q5BJE1 867 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 GPATCH4Q5T3I0 446 aaKnown RBP11.42□□□□□ -0.58
CCDC58-201ENST00000291458 BTNL9Q6UXG8 535 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 RAB11FIP4Q86YS3 637 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 STAG2Q8N3U4 1231 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 FAM133AQ8N9E0 248 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 ARRDC4Q8NCT1 418 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 PIBF1Q8WXW3 757 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC58-201ENST00000291458 ESYT1Q9BSJ8 1104 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 CYP39A1Q9NYL5 469 aa11.42□□□□□ -0.58
CCDC58-201ENST00000291458 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
CCDC58-201ENST00000291458 BAZ2BQ9UIF8 2168 aaKnown RBP11.41□□□□□ -0.58
CCDC58-201ENST00000291458 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-201ENST00000291458 ERICH2A1L162 156 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 NUDT7P0C024 238 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 C6orf222P0C671 652 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-201ENST00000291458 CAPN2P17655 700 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
CCDC58-201ENST00000291458 WTAPQ15007 396 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 QRICH1Q2TAL8 776 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 CCDC144BQ3MJ40 725 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 TRIM60Q495X7 471 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 ASPRV1Q53RT3 343 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 TMEM67Q5HYA8 995 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 HOMER1Q86YM7 354 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 ADGRF4Q8IZF3 695 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 NCOA7Q8NI08 942 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 NUP133Q8WUM0 1156 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 MYL10Q9BUA6 226 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 LSG1Q9H089 658 aaKnown RBP11.41□□□□□ -0.58
CCDC58-201ENST00000291458 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 LTBP2Q14767 1821 aa11.41□□□□□ -0.58
CCDC58-201ENST00000291458 ASB14A6NK59 587 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 MAGEA10P43363 369 aaPredicted RBP11.4□□□□□ -0.58
CCDC58-201ENST00000291458 ANTXR2P58335 489 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 BEX3Q00994 111 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 SEC23AQ15436 765 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 RNF207Q6ZRF8 634 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC58-201ENST00000291458 RNF180Q86T96 592 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 LRRC2Q9BYS8 371 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
CCDC58-201ENST00000291458 TRIOBPQ9H2D6 2365 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 A0A1W2PQ45 241 aaPredicted RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 A0A1W2PQY0 241 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 SLC27A2O14975 620 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 CDC45O75419 566 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 ALDH5A1P51649 535 aaPredicted RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 COL9A3Q14050 684 aaPredicted RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 SART3Q15020 963 aaKnown RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 BMP2KLQ5H9B9 411 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 CREB3L3Q68CJ9 461 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 NFXL1Q6ZNB6 911 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 MB21D2Q8IYB1 491 aaPredicted RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 MSL3Q8N5Y2 521 aaKnown RBP11.39□□□□□ -0.59
CCDC58-201ENST00000291458 CLEC4DQ8WXI8 215 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 VTI1AQ96AJ9 217 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 ABHD16BQ9H3Z7 469 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 PDGFCQ9NRA1 345 aa11.39□□□□□ -0.59
CCDC58-201ENST00000291458 WDR19Q8NEZ3 1342 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 KLRF2D3W0D1 207 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 PRC1O43663 620 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 RXRAP19793 462 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 EMP3P54852 163 aa11.38□□□□□ -0.59
CCDC58-201ENST00000291458 RPS6P62753 249 aaKnown RBP11.38□□□□□ -0.59
CCDC58-201ENST00000291458 TNFAIP2Q03169 654 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms