RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 NFIBO00712 420 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 TMEM132BQ14DG7 1078 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 SYCP1Q15431 976 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 JAKMIP3Q5VZ66 844 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 PIK3AP1Q6ZUJ8 805 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 FBXO11Q86XK2 927 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 REPS2Q8NFH8 660 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 CHURC1Q8WUH1 139 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 ASCC2Q9H1I8 757 aaPredicted RBP13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 SLC38A10Q9HBR0 1119 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 CLIC4Q9Y696 253 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 CCL15-CCL14A0A0B4J2E2 113 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 U2AF2P26368 475 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 FKBP1BP68106 108 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 CCL15Q16663 113 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 NOSTRINQ8IVI9 506 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 RBM46Q8TBY0 533 aaKnown RBP13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 UIMC1Q96RL1 719 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
CHRNB3-201ENST00000289957 CXCL11O14625 94 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 EDIL3O43854 480 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 DSG3P32926 999 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 KRT2P35908 639 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 CYP4F22Q6NT55 531 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 BICD2Q8TD16 824 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 CCDC94Q9BW85 323 aaPredicted RBP13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF214Q9UL59 606 aaPredicted RBP13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 CTIFO43310 598 aaKnown RBP13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 NR1I2O75469 434 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 GNL2Q13823 731 aaKnown RBP13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 PLS1Q14651 629 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 COG2Q14746 738 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 STX1AQ16623 288 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 FAM160B2Q86V87 743 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 PAGR1Q9BTK6 254 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 AMNQ9BXJ7 453 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 CCPG1Q9ULG6 757 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 PCDHA4Q9UN74 947 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 AGTPBP1Q9UPW5 1226 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 TLL2Q9Y6L7 1015 aa13.05□□□□□ -0.32
CHRNB3-201ENST00000289957 FAM155AB1AL88 458 aaPredicted RBP13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 MEIS2O14770 477 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 NEMFO60524 1076 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 PLA2G6O60733 806 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 ALAS1P13196 640 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 Q3C1V9 767 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 LUZP1Q86V48 1076 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 PCDHB6Q9Y5E3 794 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 CNMDO75829 334 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF165P49910 485 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 UBXN2AP68543 259 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 INF2Q27J81 1249 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 RGMBQ6NW40 437 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 PROCA1Q8NCQ7 364 aaPredicted RBP13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 MRFAP1L1Q96HT8 127 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
CHRNB3-201ENST00000289957 TMEM88BA6NKF7 163 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 PDHXO00330 501 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 CFBP00751 764 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 ICAM1P05362 532 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 XBP1P17861 261 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 ADCY7P51828 1080 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 HERVK_113P62684 666 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 IQCB1Q15051 598 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 SNRNP48Q6IEG0 339 aaKnown RBP13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 FOXP1Q9H334 677 aaPredicted RBP13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
CHRNB3-201ENST00000289957 DNAH12Q6ZR08 3092 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 AOC2O75106 756 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 PTGS1P23219 599 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 HOXA7P31268 230 aaPredicted RBP13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 IRX3P78415 501 aaPredicted RBP13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 CAMK4Q16566 473 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 FCHSD1Q86WN1 690 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 C17orf53Q8N3J3 647 aaPredicted RBP13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 GJA10Q969M2 543 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 RBPJLQ9UBG7 517 aa13.02□□□□□ -0.32
CHRNB3-201ENST00000289957 CLK2P49760 499 aaKnown RBP13.02□□□□□ -0.33
CHRNB3-201ENST00000289957 PLCB2Q00722 1185 aa13.02□□□□□ -0.33
CHRNB3-201ENST00000289957 SAFBQ15424 915 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHRNB3-201ENST00000289957 SPC24Q8NBT2 197 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms