RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 SUPT20HQ8NEM7 779 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 SERTAD1Q9UHV2 236 aa11.73□□□□□ -0.53
ERCC3-201ENST00000285398 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 BAZ2AQ9UIF9 1905 aaKnown RBP11.73□□□□□ -0.53
ERCC3-201ENST00000285398 SH2B2O14492 632 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-201ENST00000285398 OPA1O60313 960 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 FSBPO95073 299 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 ABL1P00519 1130 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 PTPREP23469 700 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 RHBDL3P58872 404 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 CXCL9Q07325 125 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 NFIAQ12857 509 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 NEDD9Q14511 834 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 SPECC1Q5M775 1068 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 IQCEQ6IPM2 695 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 CCNI2Q6ZMN8 369 aaPredicted RBP11.72□□□□□ -0.53
ERCC3-201ENST00000285398 NIM1KQ8IY84 436 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 TEX11Q8IYF3 940 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 SLC44A5Q8NCS7 719 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 HAUS4Q9H6D7 363 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 SENP2Q9HC62 589 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 ACTN4O43707 911 aaKnown RBP11.72□□□□□ -0.53
ERCC3-201ENST00000285398 PCNTO95613 3336 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 CRKP46108 304 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 ERVK-24P63145 666 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 PPARAQ07869 468 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 TCP10Q12799 353 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 CDKAL1Q5VV42 579 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 APOA5Q6Q788 366 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 MICALCLQ6ZW33 695 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 ADAMTSL1Q8N6G6 1762 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 PHKBQ93100 1093 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 MMS19Q96T76 1030 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 FAM184BQ9ULE4 1060 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 GUCA1BQ9UMX6 200 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 SYNRGQ9UMZ2 1314 aa11.72□□□□□ -0.53
ERCC3-201ENST00000285398 MYH2Q9UKX2 1941 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 GRIN2DO15399 1336 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 STK36Q9NRP7 1315 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 GPR75-ASB3A0A0A6YYF3 556 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 NDUFAB1O14561 156 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 CHUKO15111 745 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 BAG3O95817 575 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 YBX3P16989 372 aaKnown RBP eCLIP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 GNAT2P19087 354 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 GSTO1P78417 241 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 NTRK3Q16288 839 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 APOBEC3HQ6NTF7 200 aaKnown RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 NOSTRINQ8IVI9 506 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 EHBP1Q8NDI1 1231 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 ZNF526Q8TF50 670 aaPredicted RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 GDAP1L1Q96MZ0 367 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 NUP88Q99567 741 aaPredicted RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 SH3GL2Q99962 352 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
ERCC3-201ENST00000285398 DDX4Q9NQI0 724 aaKnown RBP11.71□□□□□ -0.53
ERCC3-201ENST00000285398 RANBP6O60518 1105 aaKnown RBP11.71□□□□□ -0.54
ERCC3-201ENST00000285398 GRIN1Q05586 938 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 PAPD7Q5XG87 772 aaKnown RBP11.71□□□□□ -0.54
ERCC3-201ENST00000285398 ZFPM1Q8IX07 1006 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 GRAMD1CQ8IYS0 662 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 USP40Q9NVE5 1235 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 ZNRF3Q9ULT6 936 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 GJA3Q9Y6H8 435 aa11.71□□□□□ -0.54
ERCC3-201ENST00000285398 MEFVO15553 781 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 EGFRP00533 1210 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 RXRAP19793 462 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 TOB1P50616 345 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 RBM26Q5T8P6 1007 aaKnown RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 TEKT1Q969V4 418 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 EPN1Q9Y6I3 576 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 LDHCP07864 332 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 FNTAP49354 379 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 SATB1Q01826 763 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 CUL4BQ13620 913 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 KLHL10Q6JEL2 608 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 CDC42EP5Q6NZY7 148 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 YTHDF3Q7Z739 585 aaKnown RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 CAGE1Q8TC20 777 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 RUBCNQ92622 972 aa11.7□□□□□ -0.54
ERCC3-201ENST00000285398 PRMT6Q96LA8 375 aaPredicted RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 TDRD3Q9H7E2 651 aaKnown RBP11.7□□□□□ -0.54
ERCC3-201ENST00000285398 GAKO14976 1311 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 FAM196BA6NMK8 535 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 ENC1O14682 589 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 NMT2O60551 498 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 NDUFA10O95299 355 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 EPB41P11171 864 aaKnown RBP11.69□□□□□ -0.54
ERCC3-201ENST00000285398 SKOR1P84550 965 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 FAM47AQ5JRC9 791 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 SOGA3Q5TF21 947 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 MFSD6Q6ZSS7 791 aa11.69□□□□□ -0.54
ERCC3-201ENST00000285398 EP400NLQ6ZTU2 488 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms