RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IFNL3Q8IZI9 196 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 HNRNPLLQ8WVV9 542 aaKnown RBP5.66□□□□□ -1.5
CD44-202ENST00000278385 CRBNQ96SW2 442 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 FAM126AQ9BYI3 521 aaPredicted RBP5.66□□□□□ -1.5
CD44-202ENST00000278385 INTUQ9ULD6 942 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 RPGRIP1LQ68CZ1 1315 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 CAMSAP1Q5T5Y3 1602 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 PTPN23Q9H3S7 1636 aa5.66□□□□□ -1.5
CD44-202ENST00000278385 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.66□□□□□ -1.5
CD44-202ENST00000278385 IGF2BP3O00425 579 aaKnown RBP eCLIP5.65□□□□□ -1.5
CD44-202ENST00000278385 HYAL3O43820 417 aaPredicted RBP5.65□□□□□ -1.5
CD44-202ENST00000278385 LEFTY1O75610 366 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 HTR3BO95264 441 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 SCGB1D2O95969 90 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 IMPDH2P12268 514 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 ATF3P18847 181 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 ITIH2P19823 946 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 ITGB7P26010 798 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 TRAPPC10P48553 1259 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 CD97P48960 835 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 MORC3Q14149 939 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 IFI16Q16666 785 aaKnown RBP5.65□□□□□ -1.5
CD44-202ENST00000278385 FBXW10Q5XX13 1052 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 C14orf80Q86SX3 495 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 VSIG10LQ86VR7 867 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 DRC7Q8IY82 874 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 CHPFQ8IZ52 775 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 MYO1HQ8N1T3 1032 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 ENOX1Q8TC92 643 aaKnown RBP5.65□□□□□ -1.5
CD44-202ENST00000278385 GATA6Q92908 595 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 SECISBP2LQ93073 1101 aaKnown RBP5.65□□□□□ -1.5
CD44-202ENST00000278385 FBXL18Q96ME1 805 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 FERD3LQ96RJ6 166 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 FBRSQ9HAH7 460 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 REV1Q9UBZ9 1251 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 KCNH3Q9ULD8 1083 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 STRIP2Q9ULQ0 834 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 MAPK8IP1Q9UQF2 711 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 PCDHB14Q9Y5E9 798 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
CD44-202ENST00000278385 CLTCQ00610 1675 aaKnown RBP5.65□□□□□ -1.51
CD44-202ENST00000278385 ROCK1Q13464 1354 aa5.65□□□□□ -1.51
CD44-202ENST00000278385 ANKRD50Q9ULJ7 1429 aa5.65□□□□□ -1.51
CD44-202ENST00000278385 ABCC3O15438 1527 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 CEP170BQ9Y4F5 1589 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 SHTN1A0MZ66 631 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 CCDC85CA6NKD9 419 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 GREM1O60565 184 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 VDRP11473 427 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 RAG1P15918 1043 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 NTF4P34130 210 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 MCL1Q07820 350 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 IDI1Q13907 227 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 COL9A2Q14055 689 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 SLBPQ14493 270 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD44-202ENST00000278385 NKG7Q16617 165 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 CCDC184Q52MB2 194 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 DALRD3Q5D0E6 543 aaKnown RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 TMEM201Q5SNT2 666 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 ACBD5Q5T8D3 534 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 ZKSCAN2Q63HK3 967 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 GK5Q6ZS86 529 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 DDX42Q86XP3 938 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD44-202ENST00000278385 TP53INP2Q8IXH6 220 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 REXO1Q8N1G1 1221 aaKnown RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 TEX19Q8NA77 164 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 AGBL5Q8NDL9 886 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 MYRIPQ8NFW9 859 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 TTC8Q8TAM2 541 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 E2F7Q96AV8 911 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 HRASLS5Q96KN8 279 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 CCDC74BQ96LY2 380 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 DPH2Q9BQC3 489 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 LRRC3Q9BY71 257 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 ASCC2Q9H1I8 757 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 BRMS1Q9HCU9 246 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 KCNQ5Q9NR82 932 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 UBP1Q9NZI7 540 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 TJP2Q9UDY2 1190 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 ADAMTS1Q9UHI8 967 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 SLC5A6Q9Y289 635 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 MRPS23Q9Y3D9 190 aaKnown RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 CORINQ9Y5Q5 1042 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 ZNF335Q9H4Z2 1342 aaPredicted RBP5.64□□□□□ -1.51
CD44-202ENST00000278385 ADGRL2O95490 1459 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 ERVK-7P63135 1459 aa5.64□□□□□ -1.51
CD44-202ENST00000278385 EIF2AK4Q9P2K8 1649 aaKnown RBP5.63□□□□□ -1.51
CD44-202ENST00000278385 CBX7O95931 251 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 CEACAM5P06731 702 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 CNGA1P29973 690 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 KIR3DL1P43629 444 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 IFRD2Q12894 506 aaPredicted RBP5.63□□□□□ -1.51
CD44-202ENST00000278385 GRAMD1BQ3KR37 738 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 CDH24Q86UP0 819 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 DTX1Q86Y01 620 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 Q8N3U1 123 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 FAM181AQ8N9Y4 354 aa5.63□□□□□ -1.51
CD44-202ENST00000278385 FLCNQ8NFG4 579 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms