RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 NBPF9Q3BBW0 867 aa19■□□□□ 0.63
CHKA-201ENST00000265689 GLIPR1L2Q4G1C9 344 aa19■□□□□ 0.63
CHKA-201ENST00000265689 SPECC1LQ69YQ0 1117 aa19■□□□□ 0.63
CHKA-201ENST00000265689 IGSF22Q8N9C0 903 aa19■□□□□ 0.63
CHKA-201ENST00000265689 NUP88Q99567 741 aaPredicted RBP19■□□□□ 0.63
CHKA-201ENST00000265689 FHDC1Q9C0D6 1143 aaPredicted RBP19■□□□□ 0.63
CHKA-201ENST00000265689 TMX1Q9H3N1 280 aa19■□□□□ 0.63
CHKA-201ENST00000265689 PSTPIP2Q9H939 334 aa19■□□□□ 0.63
CHKA-201ENST00000265689 RWDD2AQ9UIY3 292 aa19■□□□□ 0.63
CHKA-201ENST00000265689 DYNC1I1O14576 645 aa19■□□□□ 0.63
CHKA-201ENST00000265689 NRDCO43847 1150 aa19■□□□□ 0.63
CHKA-201ENST00000265689 PTPN14Q15678 1187 aa19■□□□□ 0.63
CHKA-201ENST00000265689 CSRNP1Q96S65 589 aa19■□□□□ 0.63
CHKA-201ENST00000265689 ZNRF3Q9ULT6 936 aa19■□□□□ 0.63
CHKA-201ENST00000265689 ATRNL1Q5VV63 1379 aa19■□□□□ 0.63
CHKA-201ENST00000265689 F5H6K3 240 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 GH2P01242 217 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 MRPL12P52815 198 aaKnown RBP18.99■□□□□ 0.63
CHKA-201ENST00000265689 SNAP25P60880 206 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 KLRC3Q07444 240 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 CEP135Q66GS9 1140 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 ZNF592Q92610 1267 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 VEZTQ9HBM0 779 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 GJA3Q9Y6H8 435 aa18.99■□□□□ 0.63
CHKA-201ENST00000265689 VIL1P09327 827 aaKnown RBP18.99■□□□□ 0.63
CHKA-201ENST00000265689 ADD3Q9UEY8 706 aaKnown RBP18.99■□□□□ 0.63
CHKA-201ENST00000265689 ADKP55263 362 aaKnown RBP18.98■□□□□ 0.63
CHKA-201ENST00000265689 CDC37Q16543 378 aaPredicted RBP18.98■□□□□ 0.63
CHKA-201ENST00000265689 GMLQ99445 158 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 CUEDC2Q9H467 287 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 PCDHA1Q9Y5I3 950 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 SPDYE2BA6NHP3 402 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L15C9J2P7 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L13C9JLJ4 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L11C9JVI0 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L18D6R9N7 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L22D6RA61 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L17D6RBQ6 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L19D6RCP7 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L20D6RJB6 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 SPDYE6P0CI01 402 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L24Q0WX57 530 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 KCNB1Q14721 858 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 USP17L6PQ6QN14 398 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 CCDC112Q8NEF3 446 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 PPP1R13BQ96KQ4 1090 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 LRWD1Q9UFC0 647 aa18.98■□□□□ 0.63
CHKA-201ENST00000265689 NDUFB10O96000 172 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 MYL1P05976 194 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.631e-7■■■■□ 22.2
CHKA-201ENST00000265689 KCNJ6P48051 423 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 TMEM139Q8IV31 216 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 ADSSL1Q8N142 457 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 TC2NQ8N9U0 490 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 TRIM49BA6NDI0 452 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 POTEMA6NI47 508 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 RHOBTB3O94955 611 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 FXR2P51116 673 aaKnown RBP eCLIP18.97■□□□□ 0.63
CHKA-201ENST00000265689 GRB10Q13322 594 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 SAMD7Q7Z3H4 446 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 GJA10Q969M2 543 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 TRIM9Q9C026 710 aa18.97■□□□□ 0.63
CHKA-201ENST00000265689 CCT6AP40227 531 aaKnown RBP18.96■□□□□ 0.63
CHKA-201ENST00000265689 PMS1P54277 932 aaKnown RBP18.96■□□□□ 0.63
CHKA-201ENST00000265689 JDP2Q8WYK2 163 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 CALML4Q96GE6 196 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 TMEM39BQ9GZU3 492 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 PDCL3Q9H2J4 239 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.96■□□□□ 0.632e-8■■■■■ 32.1
CHKA-201ENST00000265689 MAGEF1Q9HAY2 307 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 TMOD2Q9NZR1 351 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 A0A1W2PRG0 241 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 KRT31Q15323 416 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 PPP4R3AQ6IN85 833 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 GMCL1P1Q8NEA9 526 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 CTAGE1Q96RT6 745 aa18.96■□□□□ 0.63
CHKA-201ENST00000265689 ZNF70Q9UC06 446 aaPredicted RBP18.96■□□□□ 0.63
CHKA-201ENST00000265689 DDX25Q9UHL0 483 aaKnown RBP18.96■□□□□ 0.63
CHKA-201ENST00000265689 PBX1P40424 430 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 DLGAP5Q15398 846 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 TMEM266Q2M3C6 531 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 MIGA2Q7L4E1 593 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 CREBRFQ8IUR6 639 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 PNMA5Q96PV4 448 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 UIMC1Q96RL1 719 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 ZNF541Q9H0D2 1346 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 ASIC1P78348 528 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 IKQ13123 557 aaPredicted RBP18.95■□□□□ 0.62
CHKA-201ENST00000265689 FILIP1LQ4L180 1135 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 GIMAP8Q8ND71 665 aaPredicted RBP18.95■□□□□ 0.62
CHKA-201ENST00000265689 HAS1Q92839 578 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 C7orf25Q9BPX7 421 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 LIMA1Q9UHB6 759 aaKnown RBP18.95■□□□□ 0.62
CHKA-201ENST00000265689 FZD1Q9UP38 647 aa18.95■□□□□ 0.62
CHKA-201ENST00000265689 TAL1P17542 331 aaPredicted RBP18.94■□□□□ 0.62
CHKA-201ENST00000265689 SPICE1Q8N0Z3 855 aa18.94■□□□□ 0.62
CHKA-201ENST00000265689 OGFOD1Q8N543 542 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms