RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 CCDC65Q8IXS2 484 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 CCDC43Q96MW1 224 aaKnown RBP18.14■□□□□ 0.49
CTCF-201ENST00000264010 TMEM60Q9H2L4 133 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 DHX36Q9H2U1 1008 aaKnown RBP18.14■□□□□ 0.49
CTCF-201ENST00000264010 THAP9Q9H5L6 903 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 DDX25Q9UHL0 483 aaKnown RBP18.14■□□□□ 0.49
CTCF-201ENST00000264010 HDAC9Q9UKV0 1011 aa18.14■□□□□ 0.49
CTCF-201ENST00000264010 A0A087X0B3 334 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 PPP1R3GB7ZBB8 358 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 ATP2C2O75185 946 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 P2RX5Q93086 422 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 FAM163AQ96GL9 167 aaPredicted RBP18.13■□□□□ 0.49
CTCF-201ENST00000264010 SLF1Q9BQI6 1058 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 GUCA1BQ9UMX6 200 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 PPARDQ03181 441 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 KCNB1Q14721 858 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 GBP3Q9H0R5 595 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 ADD3Q9UEY8 706 aaKnown RBP18.13■□□□□ 0.49
CTCF-201ENST00000264010 COL16A1Q07092 1604 aaPredicted RBP18.13■□□□□ 0.49
CTCF-201ENST00000264010 FAM205AQ6ZU69 1335 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 SOWAHDA6NJG2 315 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 KRT86O43790 486 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 CCNE1P24864 410 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 TUBB4BP68371 445 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 RBM26Q5T8P6 1007 aaKnown RBP18.13■□□□□ 0.49
CTCF-201ENST00000264010 KCTD1Q719H9 257 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 SH3RF1Q7Z6J0 888 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 EHMT1Q9H9B1 1298 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 PCDHA12Q9UN75 941 aa18.13■□□□□ 0.49
CTCF-201ENST00000264010 HOXA10P31260 410 aaPredicted RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 HSPA1LP34931 641 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 SLC16A2P36021 539 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 PODNQ7Z5L7 613 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 OGFOD1Q8N543 542 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 CCDC42Q96M95 316 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 NT5C3AQ9H0P0 336 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 AKR1B10O60218 316 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 TC2NQ8N9U0 490 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 LARP4BQ92615 738 aaKnown RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 KANSL2Q9H9L4 492 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 CD44P16070 742 aaKnown RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 GCFC2P16383 781 aaKnown RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 IQCEQ6IPM2 695 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 TOGARAM2Q6ZUX3 1019 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 CCDC91Q7Z6B0 441 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 SUPT20HQ8NEM7 779 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 NAPGQ99747 312 aaPredicted RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 TUBGCP2Q9BSJ2 902 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 LIMA1Q9UHB6 759 aaKnown RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 ZBTB12Q9Y330 459 aaPredicted RBP18.12■□□□□ 0.49
CTCF-201ENST00000264010 PCDHA1Q9Y5I3 950 aa18.12■□□□□ 0.49
CTCF-201ENST00000264010 PLCH1Q4KWH8 1693 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 LRP5O75197 1615 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 CTAGE15A4D2H0 777 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 CTAGE8P0CG41 777 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
CTCF-201ENST00000264010 CRKP46108 304 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 ICA1Q05084 483 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 CTAGE6Q86UF2 777 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 CTAGE4Q8IX94 777 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 CNKSR1Q969H4 720 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 SLC39A2Q9NP94 309 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 TMEM260Q9NX78 707 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 TDRD12Q587J7 1177 aaKnown RBP18.11■□□□□ 0.49
CTCF-201ENST00000264010 PPP1R18Q6NYC8 613 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 PDXDC2PQ6P474 469 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 ARFGAP3Q9NP61 516 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 KCND1Q9NSA2 647 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 COL22A1Q8NFW1 1626 aaPredicted RBP18.11■□□□□ 0.49
CTCF-201ENST00000264010 KDM3AQ9Y4C1 1321 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 EFCAB8A8MWE9 144 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 PDHBP11177 359 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 MCTP2Q6DN12 878 aa18.11■□□□□ 0.49
CTCF-201ENST00000264010 TRAF5O00463 557 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 HAUS3Q68CZ6 603 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 CCDC122Q5T0U0 273 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 ANKRD7Q92527 254 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 CNOT6LQ96LI5 555 aaKnown RBP18.1■□□□□ 0.49
CTCF-201ENST00000264010 PUF60Q9UHX1 559 aaKnown RBP18.1■□□□□ 0.49
CTCF-201ENST00000264010 ESYT2A0FGR8 921 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 KIF5AQ12840 1032 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 UBE2SQ16763 222 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 ADSSL1Q8N142 457 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 IQCDQ96DY2 449 aa18.1■□□□□ 0.49
CTCF-201ENST00000264010 TRIM49BA6NDI0 452 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 MAP2K2P36507 400 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 SF3B2Q13435 895 aaKnown RBP18.09■□□□□ 0.49
CTCF-201ENST00000264010 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 EPN1Q9Y6I3 576 aaPredicted RBP18.09■□□□□ 0.49
CTCF-201ENST00000264010 POLRMTO00411 1230 aaKnown RBP18.09■□□□□ 0.49
CTCF-201ENST00000264010 TBCAO75347 108 aaKnown RBP18.09■□□□□ 0.49
CTCF-201ENST00000264010 ABCB5Q2M3G0 1257 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 CCDC181Q5TID7 509 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 HHIPL2Q6UWX4 724 aa18.09■□□□□ 0.49
CTCF-201ENST00000264010 CCDC84Q86UT8 332 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms