RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 RREB1Q92766 1687 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 MCM3P25205 808 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 GGCXP38435 758 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 AARSP49588 968 aaKnown RBP eCLIP21.58■■□□□ 1.044e-6■■■■■ 30.6
SCARB1-201ENST00000261693 NAPAP54920 295 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 DIXDC1Q155Q3 683 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 RETREG2Q8NC44 543 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 PSMB7Q99436 277 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 TMEM47Q9BQJ4 181 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 RASSF4Q9H2L5 321 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 FAM207AQ9NSI2 230 aaPredicted RBP21.58■■□□□ 1.04
SCARB1-201ENST00000261693 RSPH14Q9UHP6 348 aa21.58■■□□□ 1.04
SCARB1-201ENST00000261693 TARSL2A2RTX5 802 aaKnown RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 EPHB6O15197 1021 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 GNAQP50148 359 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 ZNF662Q6ZS27 426 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 DAGLBQ8NCG7 672 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 AFAP1L1Q8TED9 768 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 CCDC47Q96A33 483 aaKnown RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 SELENOOQ9BVL4 669 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 MLXIPQ9HAP2 919 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 KLRF2D3W0D1 207 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 PRPF6O94906 941 aaKnown RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 SPA17Q15506 151 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 C2CD5Q86YS7 1000 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 KIAA0895Q8NCT3 520 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 TGFBRAP1Q8WUH2 860 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 VAT1LQ9HCJ6 419 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 MKRN1Q9UHC7 482 aaKnown RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 CAPN6Q9Y6Q1 641 aa21.57■■□□□ 1.04
SCARB1-201ENST00000261693 ZC3H4Q9UPT8 1303 aaKnown RBP21.57■■□□□ 1.04
SCARB1-201ENST00000261693 ANKRD65E5RJM6 399 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 LAD1O00515 517 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 PRPHP41219 470 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 MATR3P43243 847 aaKnown RBP eCLIP21.56■■□□□ 1.048e-7■■□□□ 13.5
SCARB1-201ENST00000261693 VAV2P52735 878 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 EZH2Q15910 746 aaKnown RBP21.56■■□□□ 1.04
SCARB1-201ENST00000261693 FKBP15Q5T1M5 1219 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 CCNI2Q6ZMN8 369 aaPredicted RBP21.56■■□□□ 1.04
SCARB1-201ENST00000261693 FAM114A1Q8IWE2 563 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 LINC00116Q8NCU8 138 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 RPGRIP1Q96KN7 1286 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 HDAC7Q8WUI4 952 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 PURBQ96QR8 312 aaKnown RBP21.56■■□□□ 1.04
SCARB1-201ENST00000261693 CRACR2AQ9BSW2 395 aa21.56■■□□□ 1.04
SCARB1-201ENST00000261693 GRIK5Q16478 980 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 C7orf25Q9BPX7 421 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 IFIH1Q9BYX4 1025 aaKnown RBP21.55■■□□□ 1.04
SCARB1-201ENST00000261693 ANO9A1A5B4 782 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 PALM3A6NDB9 673 aaPredicted RBP21.55■■□□□ 1.04
SCARB1-201ENST00000261693 SMCO2A6NFE2 343 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 MOCS3O95396 460 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 CXCR5P32302 372 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 GALNT17Q6IS24 598 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 ANKS1AQ92625 1134 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 NLRP3Q96P20 1036 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 ERGIC2Q96RQ1 377 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 CUEDC2Q9H467 287 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 SMARCAL1Q9NZC9 954 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 ARHGAP20Q9P2F6 1191 aa21.55■■□□□ 1.04
SCARB1-201ENST00000261693 RPS6KA5O75582 802 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 ATP2B2Q01814 1243 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 SLC20A2Q08357 652 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 NONOQ15233 471 aaKnown RBP eCLIP21.54■■□□□ 1.042e-6■■■□□ 17.2
SCARB1-201ENST00000261693 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 ZSCAN29Q8IWY8 852 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-201ENST00000261693 AK8Q96MA6 479 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 MMTAG2Q9BU76 263 aaKnown RBP21.54■■□□□ 1.04
SCARB1-201ENST00000261693 TXKP42681 527 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 DYMQ7RTS9 669 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 CREG2Q8IUH2 290 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 ZMYND12Q9H0C1 365 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 MMRN2Q9H8L6 949 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 BIN2Q9UBW5 565 aaPredicted RBP21.54■■□□□ 1.04
SCARB1-201ENST00000261693 PCDHA13Q9Y5I0 950 aa21.54■■□□□ 1.04
SCARB1-201ENST00000261693 AGPSO00116 658 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 LDHBP07195 334 aaKnown RBP21.53■■□□□ 1.04
SCARB1-201ENST00000261693 POTEDQ86YR6 584 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 ANKRD13CQ8N6S4 541 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 DEF6Q9H4E7 631 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 EHD2Q9NZN4 543 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 SRP68Q9UHB9 627 aaKnown RBP21.53■■□□□ 1.04
SCARB1-201ENST00000261693 SNX12Q9UMY4 172 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 EIF4A3P38919 411 aaKnown RBP21.53■■□□□ 1.04
SCARB1-201ENST00000261693 SLC7A5Q01650 507 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 CNNM4Q6P4Q7 775 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 TBCKQ8TEA7 893 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 SMARCC1Q92922 1105 aaPredicted RBP21.53■■□□□ 1.04
SCARB1-201ENST00000261693 LRRC1Q9BTT6 524 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 ANKRD2Q9GZV1 360 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 MAGEF1Q9HAY2 307 aa21.53■■□□□ 1.04
SCARB1-201ENST00000261693 KIF11P52732 1056 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 NFRKBQ6P4R8 1299 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 NEK8Q86SG6 692 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
SCARB1-201ENST00000261693 TMEM260Q9NX78 707 aa21.52■■□□□ 1.04
SCARB1-201ENST00000261693 JRKLQ9Y4A0 524 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms