RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SPTLC3Q9NUV7 552 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 PCDHA12Q9UN75 941 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 USP20Q9Y2K6 914 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 A0A1W2PRG0 241 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 TRAF5O00463 557 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 CLIC2O15247 247 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 ZMYND10O75800 440 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 ATP2C1P98194 919 aaPredicted RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KRT31Q15323 416 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 ZNF569Q5MCW4 686 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 RBM43Q6ZSC3 357 aaKnown RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 SH3BP5LQ7L8J4 393 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 ANKRD20A12PQ8NF67 263 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 HSD3B7Q9H2F3 369 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 DISC1Q9NRI5 854 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 SEPT11Q9NVA2 429 aaKnown RBP10.2□□□□□ -0.78
CKAP2-201ENST00000258607 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 TCEAL9Q9UHQ7 104 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KCNJ18B7U540 433 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 NDUFB10O96000 172 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 RHOXF2BP0C7M4 288 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KCNJ12Q14500 433 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KIF4BQ2VIQ3 1234 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 CRY2Q49AN0 593 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 HS1BP3Q53T59 392 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 KRT79Q5XKE5 535 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 JDP2Q8WYK2 163 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 MRFAP1L1Q96HT8 127 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 WDR24Q96S15 920 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 RHOXF2Q9BQY4 288 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 PAXBP1Q9Y5B6 917 aa10.2□□□□□ -0.78
CKAP2-201ENST00000258607 TPM1P09493 284 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 EPS15P42566 896 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 TSR1Q2NL82 804 aaKnown RBP10.19□□□□□ -0.78
CKAP2-201ENST00000258607 KRT26Q7Z3Y9 468 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 ST7Q9NRC1 585 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 STK36Q9NRP7 1315 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
CKAP2-201ENST00000258607 TERF1P54274 439 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 TBC1D8BQ0IIM8 1120 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 GRM1Q13255 1194 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 TMEM266Q2M3C6 531 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 CCDC40Q4G0X9 1142 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 SPECC1LQ69YQ0 1117 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 TTLL6Q8N841 843 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.19□□□□□ -0.78
CKAP2-201ENST00000258607 FGFBP2Q9BYJ0 223 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 DEF6Q9H4E7 631 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
CKAP2-201ENST00000258607 LTBP4Q8N2S1 1624 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 SMCHD1A6NHR9 2005 aa10.19□□□□□ -0.78
CKAP2-201ENST00000258607 PALM3A6NDB9 673 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 CBFA2T2O43439 604 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PNMA6AP0CW24 399 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ADRA2BP18089 450 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PSMC6P62333 389 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 TTLL12Q14166 644 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 TMC4Q7Z404 712 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ZKSCAN4Q969J2 545 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 CCDC43Q96MW1 224 aaKnown RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ZNF341Q9BYN7 854 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 TMCO5BA8MYB1 307 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 SRGAP2O75044 1071 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 SEC31AO94979 1220 aaKnown RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 TPM2P07951 284 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 IL1R1P14778 569 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 CXCR5P32302 372 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 FAM193AP78312 1265 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 SBK1Q52WX2 424 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ZNF772Q68DY9 489 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 MLKLQ8NB16 471 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 FERMT2Q96AC1 680 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 CRAMP1Q96RY5 1269 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 DACH1Q9UI36 760 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 WDR19Q8NEZ3 1342 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 RSPH10B2B2RC85 870 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PSMA7O14818 248 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 RSPH10BP0C881 870 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 STIM1Q13586 685 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 SYCP1Q15431 976 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ECM1Q16610 540 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PPP1R13LQ8WUF5 828 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 NOC4LQ9BVI4 516 aaKnown RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 MRPL44Q9H9J2 332 aaKnown RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 AGPAT5Q9NUQ2 364 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PI4KBQ9UBF8 816 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 TUBE1Q9UJT0 475 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 ZHX1Q9UKY1 873 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PCDHB13Q9Y5F0 798 aa10.18□□□□□ -0.78
CKAP2-201ENST00000258607 PLEKP08567 350 aaPredicted RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 ZNF543Q08ER8 600 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 UTP14CQ5TAP6 766 aaKnown RBP10.17□□□□□ -0.78
CKAP2-201ENST00000258607 KIAA1328Q86T90 577 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 NIM1KQ8IY84 436 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 CUL5Q93034 780 aa10.17□□□□□ -0.78
CKAP2-201ENST00000258607 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms