RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
SDF2-201ENST00000247020 MBOAT7Q96N66 472 aa16.09■□□□□ 0.17
SDF2-201ENST00000247020 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
SDF2-201ENST00000247020 MAP3K20Q9NYL2 800 aaKnown RBP16.09■□□□□ 0.17
SDF2-201ENST00000247020 PPP1R9AQ9ULJ8 1098 aa16.09■□□□□ 0.17
SDF2-201ENST00000247020 ZHX2Q9Y6X8 837 aa16.09■□□□□ 0.17
SDF2-201ENST00000247020 COL11A1P12107 1806 aaPredicted RBP16.08■□□□□ 0.16
SDF2-201ENST00000247020 OPLAHO14841 1288 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
SDF2-201ENST00000247020 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 SREBF1P36956 1147 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 GHRHRQ02643 423 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 LDHDQ86WU2 507 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 MTMR9Q96QG7 549 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 RAB34Q9BZG1 259 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 MAF1Q9H063 256 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 TAF1DQ9H5J8 278 aaPredicted RBP16.08■□□□□ 0.16
SDF2-201ENST00000247020 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
SDF2-201ENST00000247020 EHMT1Q9H9B1 1298 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 SLC38A10Q9HBR0 1119 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 CSADQ9Y600 493 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 SNCAIPQ9Y6H5 919 aa16.08■□□□□ 0.16
SDF2-201ENST00000247020 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 EDIL3O43854 480 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 CYP3A4P08684 503 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 FXR2P51116 673 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDF2-201ENST00000247020 SNAP25P60880 206 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 MDM2Q00987 491 aaPredicted RBP16.07■□□□□ 0.16
SDF2-201ENST00000247020 CALCRLQ16602 461 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 TMEM266Q2M3C6 531 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 ANO6Q4KMQ2 910 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 NT5DC1Q5TFE4 455 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.07■□□□□ 0.16
SDF2-201ENST00000247020 CEP57L1Q8IYX8 460 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 TANGO6Q9C0B7 1094 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 TMOD4Q9NZQ9 345 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 RABGAP1Q9Y3P9 1069 aa16.07■□□□□ 0.16
SDF2-201ENST00000247020 ZNF536O15090 1300 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 UNCXA6NJT0 531 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 GCOM1H8Y6P7 765 aaPredicted RBP16.06■□□□□ 0.16
SDF2-201ENST00000247020 ZBED4O75132 1171 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 FLOT1O75955 427 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 CIITAP33076 1130 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 OAZ1P54368 228 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 PDIA5Q14554 519 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 POSTNQ15063 836 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 E2F4Q16254 413 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 CCDC174Q6PII3 467 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 USP49Q70CQ1 688 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 IGSF22Q8N9C0 903 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 CDCA5Q96FF9 252 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 NAT10Q9H0A0 1025 aaKnown RBP16.06■□□□□ 0.16
SDF2-201ENST00000247020 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 MAGEF1Q9HAY2 307 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 CCDC39Q9UFE4 941 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 SERTAD1Q9UHV2 236 aa16.06■□□□□ 0.16
SDF2-201ENST00000247020 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 TBX3O15119 743 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 SLC26A4O43511 780 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 TDP2O95551 362 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 NLRP12P59046 1061 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 ARHGAP4P98171 946 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 VGLL4Q14135 290 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 Q4G0T1 1027 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 SH3RF1Q7Z6J0 888 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 MCF2L2Q86YR7 1114 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 ANKRD13AQ8IZ07 590 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 TRIML1Q8N9V2 468 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 BPIFA3Q9BQP9 254 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 DDX25Q9UHL0 483 aaKnown RBP16.05■□□□□ 0.16
SDF2-201ENST00000247020 CCPG1Q9ULG6 757 aa16.05■□□□□ 0.16
SDF2-201ENST00000247020 SLC37A4O43826 429 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 UBA7P41226 1012 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 HMGCS2P54868 508 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 PPATQ06203 517 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 CCDC173Q0VFZ6 552 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 PDILTQ8N807 584 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 DHX58Q96C10 678 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 DISC1Q9NRI5 854 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 ADAMTS5Q9UNA0 930 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
SDF2-201ENST00000247020 A0A087X0B3 334 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 POTECB2RU33 542 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 MYL1P05976 194 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 DSG3P32926 999 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 ZNF165P49910 485 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 HSD17B4P51659 736 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 SEMA3FQ13275 785 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 CATSPERGQ6ZRH7 1159 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 SLFN12Q8IYM2 578 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 SPATA20Q8TB22 786 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 PANK2Q9BZ23 570 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 KCNMB3Q9NPA1 279 aa16.04■□□□□ 0.16
SDF2-201ENST00000247020 FZD1Q9UP38 647 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms