RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 XBP1P17861 261 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 HSD17B4P51659 736 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 NSMFQ6X4W1 530 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 SHCBP1Q8NEM2 672 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 CHST13Q8NET6 341 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 CUL5Q93034 780 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 ARHGAP39Q9C0H5 1083 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 C6orf50Q9HD87 102 aa23.12■■□□□ 1.29
SNRPA-201ENST00000243563 SLC25A27O95847 323 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 GHRHRQ02643 423 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 WDR78Q5VTH9 848 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 JAKMIP3Q5VZ66 844 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 LRRC37A2A6NM11 1700 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 ZNF236Q9UL36 1845 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 BRD1O95696 1058 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 KRT2P35908 639 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 RPS6P62753 249 aaKnown RBP23.11■■□□□ 1.29
SNRPA-201ENST00000243563 TRAF1Q13077 416 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 RESTQ13127 1097 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 BAATQ14032 418 aaPredicted RBP23.11■■□□□ 1.29
SNRPA-201ENST00000243563 CYP39A1Q9NYL5 469 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 PNMA2Q9UL42 364 aa23.11■■□□□ 1.29
SNRPA-201ENST00000243563 MCTP1Q6DN14 999 aa23.1■■□□□ 1.29
SNRPA-201ENST00000243563 SYTL5Q8TDW5 730 aaPredicted RBP23.1■■□□□ 1.29
SNRPA-201ENST00000243563 MROH8Q9H579 483 aa23.1■■□□□ 1.29
SNRPA-201ENST00000243563 DDX49Q9Y6V7 483 aaKnown RBP23.1■■□□□ 1.29
SNRPA-201ENST00000243563 ASTN1O14525 1302 aa23.1■■□□□ 1.29
SNRPA-201ENST00000243563 PIK3CDO00329 1044 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 ZSCAN22P10073 491 aaPredicted RBP23.09■■□□□ 1.29
SNRPA-201ENST00000243563 CALML3P27482 149 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 GNA11P29992 359 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 CCNA1P78396 465 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 RNF207Q6ZRF8 634 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNRPA-201ENST00000243563 GPR142Q7Z601 462 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 FAM177A1Q8N128 213 aaPredicted RBP23.09■■□□□ 1.29
SNRPA-201ENST00000243563 REXO1Q8N1G1 1221 aaKnown RBP23.09■■□□□ 1.29
SNRPA-201ENST00000243563 CHAMP1Q96JM3 812 aa23.09■■□□□ 1.29
SNRPA-201ENST00000243563 GCOM1H8Y6P7 765 aaPredicted RBP23.08■■□□□ 1.29
SNRPA-201ENST00000243563 EDIL3O43854 480 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 PGK2P07205 417 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 POLR2MP0CAP2 368 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 MRPL12P52815 198 aaKnown RBP23.08■■□□□ 1.29
SNRPA-201ENST00000243563 CNTN2Q02246 1040 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 FAM173BQ6P4H8 233 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 FCHSD1Q86WN1 690 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 WBP1LQ9NX94 342 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 FBXO40Q9UH90 709 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 MCM3APO60318 1980 aa23.08■■□□□ 1.29
SNRPA-201ENST00000243563 U2AF2P26368 475 aaKnown RBP eCLIP23.08■■□□□ 1.28
SNRPA-201ENST00000243563 GALNT17Q6IS24 598 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 ANKRD35Q8N283 1001 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 RGS22Q8NE09 1264 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 FGD4Q96M96 766 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 TAAR1Q96RJ0 339 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 MMP19Q99542 508 aa23.08■■□□□ 1.28
SNRPA-201ENST00000243563 WNT7AO00755 349 aa23.07■■□□□ 1.28
SNRPA-201ENST00000243563 COPB2P35606 906 aa23.07■■□□□ 1.28
SNRPA-201ENST00000243563 MCF2L2Q86YR7 1114 aa23.07■■□□□ 1.28
SNRPA-201ENST00000243563 FOXP1Q9H334 677 aaPredicted RBP23.07■■□□□ 1.28
SNRPA-201ENST00000243563 SAGE1Q9NXZ1 904 aa23.07■■□□□ 1.28
SNRPA-201ENST00000243563 TCHHQ07283 1943 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 GPR25O00155 361 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 F13A1P00488 732 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 MAPK4P31152 587 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 UBXN2AP68543 259 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 LACTBP83111 547 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-201ENST00000243563 MAP2K1Q02750 393 aaPredicted RBP23.06■■□□□ 1.28
SNRPA-201ENST00000243563 SAFBQ15424 915 aaKnown RBP eCLIP23.06■■□□□ 1.28
SNRPA-201ENST00000243563 PIK3AP1Q6ZUJ8 805 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 PLEKHH3Q7Z736 793 aa23.06■■□□□ 1.28
SNRPA-201ENST00000243563 DNAJC25-GNG10A0A024R161 153 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 COBLO75128 1261 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 PTPREP23469 700 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 NOSTRINQ8IVI9 506 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 IL31RAQ8NI17 732 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 BICD2Q8TD16 824 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 TRIM47Q96LD4 638 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 ANO3Q9BYT9 981 aa23.05■■□□□ 1.28
SNRPA-201ENST00000243563 SOWAHBA6NEL2 793 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 FCER1AP12319 257 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 ADORA2AP29274 412 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 SP3Q02447 781 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 GRB14Q14449 540 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 FAM133AQ8N9E0 248 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 BRMS1Q9HCU9 246 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 CIZ1Q9ULV3 898 aaPredicted RBP23.04■■□□□ 1.28
SNRPA-201ENST00000243563 NBR1Q14596 966 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 KCTD2Q14681 263 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 FOXD4L6Q3SYB3 417 aaPredicted RBP23.04■■□□□ 1.28
SNRPA-201ENST00000243563 MORN1Q5T089 497 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 FOXD4L3Q6VB84 417 aaPredicted RBP23.04■■□□□ 1.28
SNRPA-201ENST00000243563 CCAR1Q8IX12 1150 aaKnown RBP23.04■■□□□ 1.28
SNRPA-201ENST00000243563 CD99L2Q8TCZ2 262 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 ZFP91Q96JP5 570 aaPredicted RBP23.04■■□□□ 1.28
SNRPA-201ENST00000243563 CHMP5Q9NZZ3 219 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 PFASO15067 1338 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 RPTORQ8N122 1335 aa23.04■■□□□ 1.28
SNRPA-201ENST00000243563 PSMC4P43686 418 aa23.03■■□□□ 1.28
SNRPA-201ENST00000243563 TOB1P50616 345 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms