RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 NFRKBQ6P4R8 1299 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 NBPF15Q8N660 670 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 TBC1D31Q96DN5 1066 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 TACO1Q9BSH4 297 aaKnown RBP12.14□□□□□ -0.47
CCDC170-201ENST00000239374 NDST4Q9H3R1 872 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 L1RE1Q9UN81 338 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 HPSEQ9Y251 543 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 ATP6V0A2Q9Y487 856 aa12.14□□□□□ -0.47
CCDC170-201ENST00000239374 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 SPOPO43791 374 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 ZRANB2O95218 330 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 HLA-DOAP06340 250 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 CTNNA2P26232 953 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 KRT26Q7Z3Y9 468 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 SYCE1Q8N0S2 351 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 NKIRAS1Q9NYS0 192 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 AMFRQ9UKV5 643 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 TNIP1Q15025 636 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 SETDB1Q15047 1291 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 PAXIP1Q6ZW49 1069 aaPredicted RBP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 RSRC2Q7L4I2 434 aaKnown RBP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 TGFBRAP1Q8WUH2 860 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 POLD4Q9HCU8 107 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 SPDYE3A6NKU9 549 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 FAM26FQ5R3K3 315 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 LZTS2Q9BRK4 669 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 ANKRD2Q9GZV1 360 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 RAB17Q9H0T7 212 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 CUEDC2Q9H467 287 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 CTTNBP2NLQ9P2B4 639 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 NEBLO76041 1014 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 SF3B2Q13435 895 aaKnown RBP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC24Q8N4L8 307 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 ODF2LQ9ULJ1 636 aa12.13□□□□□ -0.47
CCDC170-201ENST00000239374 ARL6IP4Q66PJ3 421 aaKnown RBP12.12□□□□□ -0.47
CCDC170-201ENST00000239374 VIPAS39Q9H9C1 493 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 ZBTB1Q9Y2K1 713 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 KIF20BQ96Q89 1820 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 NCK2O43639 380 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 ATP11AP98196 1134 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 BANK1Q8NDB2 785 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 MAGEF1Q9HAY2 307 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 VEZTQ9HBM0 779 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
CCDC170-201ENST00000239374 TFR2Q9UP52 801 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 GSTA5Q7RTV2 222 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 RNF14Q9UBS8 474 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 GSG1L2A8MUP6 293 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 MYL1P05976 194 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 TMTC3Q6ZXV5 915 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 ZNF804AQ7Z570 1209 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
CCDC170-201ENST00000239374 MICAL1Q8TDZ2 1067 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 LARP4BQ92615 738 aaKnown RBP12.12□□□□□ -0.47
CCDC170-201ENST00000239374 OSBPL9Q96SU4 736 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 AGXT2Q9BYV1 514 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 ARMCX3Q9UH62 379 aaPredicted RBP12.12□□□□□ -0.47
CCDC170-201ENST00000239374 MROH1Q8NDA8 1641 aa12.12□□□□□ -0.47
CCDC170-201ENST00000239374 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 GNA14O95837 355 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 IFNAR2P48551 515 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 TAOK1Q7L7X3 1001 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC105Q8IYK2 499 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 PANK4Q9NVE7 773 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 XRCC5P13010 732 aaKnown RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 PLCG2P16885 1265 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ADAM9Q13443 819 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 FBXW10Q5XX13 1052 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 GPBP1Q86WP2 473 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ANKRD42Q8N9B4 389 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 PLCB1Q9NQ66 1216 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ADAMTS1Q9UHI8 967 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 NOVA2Q9UNW9 492 aaKnown RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 PCP11498 1178 aaKnown RBP12.11□□□□□ -0.47
CCDC170-201ENST00000239374 DPYDQ12882 1025 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 NEDD9Q14511 834 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 ALX1Q15699 326 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 GALNT17Q6IS24 598 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 UBL4BQ8N7F7 174 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 FRMD4BQ9Y2L6 1034 aa12.11□□□□□ -0.47
CCDC170-201ENST00000239374 CALUO43852 315 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms