RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 BMP3P12645 472 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 IBSPP21815 317 aaPredicted RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 RBM43Q6ZSC3 357 aaKnown RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 PANK4Q9NVE7 773 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 TUBE1Q9UJT0 475 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 PNMA6FA0A0J9YX94 578 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 ENC1O14682 589 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 FAM26FQ5R3K3 315 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 TMTC1Q8IUR5 882 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 GDAP1L1Q96MZ0 367 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 IRX2Q9BZI1 471 aaPredicted RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 MAD2L2Q9UI95 211 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTK7-201ENST00000230418 WNT7AO00755 349 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 ACTN4O43707 911 aaKnown RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 TAL1P17542 331 aaPredicted RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 STAT3P40763 770 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 PAFAH1B1P43034 410 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 QRICH1Q2TAL8 776 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 SMCR8Q8TEV9 937 aaPredicted RBP16.07■□□□□ 0.16
PTK7-201ENST00000230418 ACBD3Q9H3P7 528 aa16.07■□□□□ 0.16
PTK7-201ENST00000230418 PLEKHG2Q9H7P9 1386 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 SFI1A8K8P3 1242 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 F5H6K3 240 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 KRT83P78385 493 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 KLRC3Q07444 240 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 ARL6IP4Q66PJ3 421 aaKnown RBP16.06■□□□□ 0.16
PTK7-201ENST00000230418 MYOCDQ8IZQ8 938 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 FBXL16Q8N461 479 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 OSBPL5Q9H0X9 879 aaPredicted RBP16.06■□□□□ 0.16
PTK7-201ENST00000230418 ARFGAP3Q9NP61 516 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 CETN3O15182 167 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 GAS7O60861 476 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 PDHBP11177 359 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 SSR1P43307 286 aaKnown RBP16.06■□□□□ 0.16
PTK7-201ENST00000230418 TERF1P54274 439 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 CYP27A1Q02318 531 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 HS2ST1Q7LGA3 356 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 ALS2CR12Q96Q35 445 aa16.06■□□□□ 0.16
PTK7-201ENST00000230418 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTK7-201ENST00000230418 STXBP3O00186 592 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 STX10O60499 249 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 CCZ1BP86790 482 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 CCZ1P86791 482 aaPredicted RBP16.05■□□□□ 0.16
PTK7-201ENST00000230418 ODF2Q5BJF6 829 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 ZNF384Q8TF68 577 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 P2RX5Q93086 422 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 BICD1Q96G01 975 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 HPSEQ9Y251 543 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 E9PMD0 336 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 TTLL6Q8N841 843 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 JAKMIP2Q96AA8 810 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 C5P01031 1676 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 VPS36Q86VN1 386 aa16.05■□□□□ 0.16
PTK7-201ENST00000230418 A0A087X0B3 334 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 ZBTB5O15062 677 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 CCDC94Q9BW85 323 aaPredicted RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 EPC1Q9H2F5 836 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 ZNF142P52746 1687 aaPredicted RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 BACH1O14867 736 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 PPARDQ03181 441 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 BMS1Q14692 1282 aaKnown RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 DHX36Q9H2U1 1008 aaKnown RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 GOPCQ9HD26 462 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 SCN11AQ9UI33 1791 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 TACC1O75410 805 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 CD44P16070 742 aaKnown RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
PTK7-201ENST00000230418 SPTLC3Q9NUV7 552 aa16.04■□□□□ 0.16
PTK7-201ENST00000230418 POTEB3A0JP26 581 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 POTECB2RU33 542 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 FLOT1O75955 427 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 TCP11X2Q5H9J9 407 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 FAM83BQ5T0W9 1011 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 POTEBQ6S5H4 581 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 DEFB132Q7Z7B7 95 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 NAPGQ99747 312 aaPredicted RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 DDX4Q9NQI0 724 aaKnown RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 SH3GLB2Q9NR46 395 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 RWDD2AQ9UIY3 292 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 TESPA1A2RU30 521 aaPredicted RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 CCDC169A6NNP5 214 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 DNM2P50570 870 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 CYP2J2P51589 502 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 PPP4CP60510 307 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 SLC35F6Q8N357 371 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 PIGOQ8TEQ8 1089 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 DDX12PQ92771 950 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
PTK7-201ENST00000230418 EPN1Q9Y6I3 576 aaPredicted RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 POLRMTO00411 1230 aaKnown RBP16.03■□□□□ 0.16
PTK7-201ENST00000230418 CYTH3O43739 400 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms