RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 KLK7P49862 253 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 NAA25Q14CX7 972 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 SLC35G1Q2M3R5 365 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 WDR59Q6PJI9 974 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 TXNRD3Q86VQ6 643 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 BLIDQ8IZY5 108 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 OTUD6BQ8N6M0 293 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 DYNLL2Q96FJ2 89 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 CPVLQ9H3G5 476 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 IL17RBQ9NRM6 502 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 MYO6Q9UM54 1294 aa10.5□□□□□ -0.73
HLA-DOA-201ENST00000229829 KCNQ2O43526 872 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 SKAP2O75563 359 aaPredicted RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 RPSAP08865 295 aaKnown RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 USP5P45974 858 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 SATB1Q01826 763 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 E2F5Q15329 346 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 ADSSL1Q8N142 457 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 HNRNPLLQ8WVV9 542 aaKnown RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 AGPAT5Q9NUQ2 364 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 SCN4AP35499 1836 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 INF2Q27J81 1249 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 NAIF1Q69YI7 327 aaPredicted RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 MB21D1Q8N884 522 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 DISC1Q9NRI5 854 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 PSD3Q9NYI0 1048 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 ORC4O43929 436 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 TRAPPC10P48553 1259 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 HERVK_113P62684 666 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 TFAP4Q01664 338 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
HLA-DOA-201ENST00000229829 GOLGB1Q14789 3259 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 RCCD1A6NED2 376 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 LRRIQ3A6PVS8 624 aaPredicted RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 KLRC4O43908 158 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 ATP1A1P05023 1023 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 MATR3P43243 847 aaKnown RBP eCLIP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 CDR1P51861 262 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 SPAG1Q07617 926 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 FAM43BQ6ZT52 329 aaPredicted RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 FBXO33Q7Z6M2 555 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 MARCH10Q8NA82 808 aaPredicted RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 FAM71BQ8TC56 605 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 ZNF507Q8TCN5 953 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 DUSP10Q9Y6W6 482 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 B4DLN1 442 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 NDUFAB1O14561 156 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 CYTH3O43739 400 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 PAX7P23759 505 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 LONP1P36776 959 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 ATP1A2P50993 1020 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 CLNS1AP54105 237 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 SARNPP82979 210 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 GPIHBP1Q8IV16 184 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 OR8K1Q8NGG5 319 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 MMS19Q96T76 1030 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 LUC7L2Q9Y383 392 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 RASSF10A6NK89 507 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 H7C1D1 291 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 GOLGA8HP0CJ92 632 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 GNGT1P63211 74 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 WHAMMP3Q1A5X7 153 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 DTHD1Q6ZMT9 781 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 PNMA1Q8ND90 353 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 FAM76AQ8TAV0 307 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 HPS3Q969F9 1004 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 TRIM47Q96LD4 638 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 RUFY1Q96T51 708 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 CRNKL1Q9BZJ0 848 aaKnown RBP10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 LACRTQ9GZZ8 138 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 GBP3Q9H0R5 595 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 RMND1Q9NWS8 449 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 PCDHA4Q9UN74 947 aa10.48□□□□□ -0.73
HLA-DOA-201ENST00000229829 ADAMTS2O95450 1211 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 DDB1Q16531 1140 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 MAP9Q49MG5 647 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 ARL6IP4Q66PJ3 421 aaKnown RBP10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 SLC44A5Q8NCS7 719 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 KAT14Q9H8E8 782 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 PCDHA6Q9UN73 950 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 PCDHA8Q9Y5H6 950 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 LGALS16A8MUM7 142 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 PCP11498 1178 aaKnown RBP10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 UBA7P41226 1012 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 PIP4K2BP78356 416 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 SF3B3Q15393 1217 aaKnown RBP10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 CCDC122Q5T0U0 273 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
HLA-DOA-201ENST00000229829 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 M0R2N6 131 aa10.46□□□□□ -0.73
HLA-DOA-201ENST00000229829 ZNF185O15231 689 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms