RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 USP17L6PQ6QN14 398 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 NOSTRINQ8IVI9 506 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 REXO1Q8N1G1 1221 aaKnown RBP16.09■□□□□ 0.17
SEC61B-201ENST00000223641 MROH8Q9H579 483 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 ACAD9Q9H845 621 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 GCOM1H8Y6P7 765 aaPredicted RBP16.08■□□□□ 0.16
SEC61B-201ENST00000223641 POLR2MP0CAP2 368 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 ERCC3P19447 782 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 CCNA1P78396 465 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 AP3B2Q13367 1082 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 UBE2SQ16763 222 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 MCTP1Q6DN14 999 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 PORCNQ9H237 461 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 R3HDMLQ9H3Y0 253 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 HOMER2Q9NSB8 354 aa16.08■□□□□ 0.16
SEC61B-201ENST00000223641 BIN2Q9UBW5 565 aaPredicted RBP16.08■□□□□ 0.16
SEC61B-201ENST00000223641 LCTP09848 1927 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
SEC61B-201ENST00000223641 CFBP00751 764 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 FOSP01100 380 aaPredicted RBP16.07■□□□□ 0.16
SEC61B-201ENST00000223641 RPS6P62753 249 aaKnown RBP16.07■□□□□ 0.16
SEC61B-201ENST00000223641 NOM1Q5C9Z4 860 aaKnown RBP16.07■□□□□ 0.16
SEC61B-201ENST00000223641 KRT25Q7Z3Z0 450 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 RASGRP4Q8TDF6 673 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 CRYGNQ8WXF5 182 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
SEC61B-201ENST00000223641 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 CYP39A1Q9NYL5 469 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 CPA4Q9UI42 421 aa16.07■□□□□ 0.16
SEC61B-201ENST00000223641 MYH7BA7E2Y1 1941 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
SEC61B-201ENST00000223641 MYSM1Q5VVJ2 828 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 JAKMIP3Q5VZ66 844 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 NCAPG2Q86XI2 1143 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 SYTL5Q8TDW5 730 aaPredicted RBP16.06■□□□□ 0.16
SEC61B-201ENST00000223641 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
SEC61B-201ENST00000223641 EFCC1Q9HA90 598 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 COL20A1Q9P218 1284 aa16.06■□□□□ 0.16
SEC61B-201ENST00000223641 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 PFASO15067 1338 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 FRMPD4Q14CM0 1322 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 FAM205CA6NFA0 338 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 EDIL3O43854 480 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 HOXA13P31271 388 aaPredicted RBP16.05■□□□□ 0.16
SEC61B-201ENST00000223641 TOB1P50616 345 aaPredicted RBP16.05■□□□□ 0.16
SEC61B-201ENST00000223641 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
SEC61B-201ENST00000223641 BAATQ14032 418 aaPredicted RBP16.05■□□□□ 0.16
SEC61B-201ENST00000223641 FAM173BQ6P4H8 233 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 CLEC17AQ6ZS10 378 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 ABRAQ8N0Z2 381 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 TNPO1Q92973 898 aaKnown RBP16.05■□□□□ 0.16
SEC61B-201ENST00000223641 RNF186Q9NXI6 227 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 ATP6V1DQ9Y5K8 247 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 TCHHQ07283 1943 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 ZNF236Q9UL36 1845 aa16.05■□□□□ 0.16
SEC61B-201ENST00000223641 MGAMO43451 1857 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 CCDC194A0A1B0GVG4 234 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 SPDYE3A6NKU9 549 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 STRNO43815 780 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 MAPK4P31152 587 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 TRAPPC10P48553 1259 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC61B-201ENST00000223641 RILPL1Q5EBL4 403 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 NSMFQ6X4W1 530 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 SLC30A10Q6XR72 485 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 PIK3AP1Q6ZUJ8 805 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 DNAJC5GQ8N7S2 189 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 ANO3Q9BYT9 981 aa16.04■□□□□ 0.16
SEC61B-201ENST00000223641 FCER1AP12319 257 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 SREBF1P36956 1147 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 USP11P51784 963 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 PGBD1Q96JS3 809 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 TAAR1Q96RJ0 339 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 SAGE1Q9NXZ1 904 aa16.03■□□□□ 0.16
SEC61B-201ENST00000223641 TRPA1O75762 1119 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 CYP3A4P08684 503 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 PTPREP23469 700 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 GRB14Q14449 540 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 INF2Q27J81 1249 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 GPR142Q7Z601 462 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 FCHSD1Q86WN1 690 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 DNERQ8NFT8 737 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 MMP19Q99542 508 aa16.02■□□□□ 0.16
SEC61B-201ENST00000223641 PCNTO95613 3336 aa16.02■□□□□ 0.15
SEC61B-201ENST00000223641 PLXNA1Q9UIW2 1896 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 ASTN1O14525 1302 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 DOCK3Q8IZD9 2030 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 CYP3A7-CYP3A51PA0A087WV96 503 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 WNT7AO00755 349 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 CYP3A7P24462 503 aa16.01■□□□□ 0.15
SEC61B-201ENST00000223641 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms