RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 ALDH8A1Q9H2A2 487 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 DDX49Q9Y6V7 483 aaKnown RBP16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 V9GY48 417 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 OPLAHO14841 1288 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 ANKRD1Q15327 319 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 HEATR3Q7Z4Q2 680 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 GPKOWQ92917 476 aaPredicted RBP eCLIP16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 DEFB118Q96PH6 123 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 ASTN1O14525 1302 aa16.97■□□□□ 0.31
PCOLCE-201ENST00000223061 CYBAP13498 195 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 ARMCX2Q7L311 632 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 MSL3Q8N5Y2 521 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 SYTL5Q8TDW5 730 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 PHKBQ93100 1093 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 BACH2Q9BYV9 841 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 ADD3Q9UEY8 706 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 CNPY2Q9Y2B0 182 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 BAZ2BQ9UIF8 2168 aaKnown RBP16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.31
PCOLCE-201ENST00000223061 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.3
PCOLCE-201ENST00000223061 GJB1P08034 283 aa16.96■□□□□ 0.3
PCOLCE-201ENST00000223061 HOXA13P31271 388 aaPredicted RBP16.96■□□□□ 0.3
PCOLCE-201ENST00000223061 MAMDC4Q6UXC1 1216 aa16.96■□□□□ 0.3
PCOLCE-201ENST00000223061 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.96■□□□□ 0.3
PCOLCE-201ENST00000223061 BRCA2P51587 3418 aa16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 ASB14A6NK59 587 aa16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 CPLX1O14810 134 aa16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 SNAI1O95863 264 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 EN2P19622 333 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 U2AF1L4Q8WU68 220 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 SLKQ9H2G2 1235 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 COL20A1Q9P218 1284 aa16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 ZHX1Q9UKY1 873 aaPredicted RBP16.95■□□□□ 0.3
PCOLCE-201ENST00000223061 GCOM1H8Y6P7 765 aaPredicted RBP16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 NTRK3Q16288 839 aa16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 WWC2Q6AWC2 1192 aa16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 TAAR1Q96RJ0 339 aa16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 SLC26A6Q9BXS9 759 aa16.94■□□□□ 0.3
PCOLCE-201ENST00000223061 ZNFX1Q9P2E3 1918 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 GJA8P48165 433 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 HSD17B4P51659 736 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 SCRN1Q12765 414 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 ANO1Q5XXA6 986 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 MAF1Q9H063 256 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 PFKFB2O60825 505 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 SGPL1O95470 568 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 TFRCP02786 760 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 ZNF865P0CJ78 1059 aaPredicted RBP16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 IFNAR1P17181 557 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 NAPAP54920 295 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 EEPD1Q7L9B9 569 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 FCHSD1Q86WN1 690 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 DNERQ8NFT8 737 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 RMDN3Q96TC7 470 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 DDX20Q9UHI6 824 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 NRBP1Q9UHY1 535 aa16.93■□□□□ 0.3
PCOLCE-201ENST00000223061 SEPT4O43236 478 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 LARGE1O95461 756 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 GHRHRQ02643 423 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 PDE4DQ08499 809 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 RABEP1Q15276 862 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 ME3Q16798 604 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 PFKFB3Q16875 520 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 ARHGEF16Q5VV41 709 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 CPLX2Q6PUV4 134 aaKnown RBP16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 NSUN6Q8TEA1 469 aaKnown RBP16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 SHISA4Q96DD7 197 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 ABHD16BQ9H3Z7 469 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 PSTPIP2Q9H939 334 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 PLXNA1Q9UIW2 1896 aa16.92■□□□□ 0.3
PCOLCE-201ENST00000223061 STXBP3O00186 592 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 DTNBO60941 627 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 SCG2P13521 617 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 EIF2AK2P19525 551 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 USP17L6PQ6QN14 398 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 FBXO16Q8IX29 292 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 TRIM22Q8IYM9 498 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 CUL5Q93034 780 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 MPHOSPH6Q99547 160 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 RNF26Q9BY78 433 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 BARHL2Q9NY43 387 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 MAP3K20Q9NYL2 800 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 RBM27Q9P2N5 1060 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 MYH6P13533 1939 aa16.91■□□□□ 0.3
PCOLCE-201ENST00000223061 SSRP1Q08945 709 aaKnown RBP16.9■□□□□ 0.3
PCOLCE-201ENST00000223061 PKN1Q16512 942 aa16.9■□□□□ 0.3
PCOLCE-201ENST00000223061 LHX8Q68G74 356 aa16.9■□□□□ 0.3
PCOLCE-201ENST00000223061 SAMD3Q8N6K7 520 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms