RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 DCCP43146 1447 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 AKR1B10O60218 316 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 DNA2P51530 1060 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 TFAP4Q01664 338 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 MEX3CQ5U5Q3 659 aaKnown RBP11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 NFRKBQ6P4R8 1299 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 CABP7Q86V35 215 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 NOC3LQ8WTT2 800 aaKnown RBP11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 KBTBD4Q9NVX7 518 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 MCM9Q9NXL9 1143 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 SNX12Q9UMY4 172 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 BICDL2A1A5D9 508 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 FGRP09769 529 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 NAP1L1P55209 391 aaKnown RBP11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 MECOMQ03112 1051 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 CREG2Q8IUH2 290 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 RNF217Q8TC41 542 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 RUFY1Q96T51 708 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 TCP11L1Q9NUJ3 509 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 PCDHA6Q9UN73 950 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 PCDHA8Q9Y5H6 950 aa11.7□□□□□ -0.54
CX3CL1-201ENST00000006053 ORC4O43929 436 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 PCP11498 1178 aaKnown RBP11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 IRAK1P51617 712 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 ATP2B2Q01814 1243 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 LETM2Q2VYF4 491 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 PNMA1Q8ND90 353 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 TRIM58Q8NG06 486 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 SLC39A2Q9NP94 309 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 PCDHA13Q9Y5I0 950 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 NCK2O43639 380 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 NTSR2O95665 410 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 USP17L8P0C7I0 530 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 ATP6V1AP38606 617 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 GNGT1P63211 74 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 TXNRD1Q16881 649 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 PARP10Q53GL7 1025 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 SPATA4Q8NEY3 305 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 BCAS4Q8TDM0 211 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 TSGA10Q9BZW7 698 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 CPVLQ9H3G5 476 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 CCDC87Q9NVE4 849 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 TFCP2L1Q9NZI6 479 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 ZNF804BA4D1E1 1349 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 BCL9O00512 1426 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
CX3CL1-201ENST00000006053 EXOC5O00471 708 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 IRF6O14896 467 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 KLRK1P26718 216 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 PRDX5P30044 214 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 EIF4A3P38919 411 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 LIG3P49916 1009 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 MIIPQ5JXC2 388 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 ZNF662Q6ZS27 426 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 AENQ8WTP8 325 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 NSUN4Q96CB9 384 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 DYNLL2Q96FJ2 89 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 CCSER1Q9C0I3 900 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 EBAG9O00559 213 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 EPHB6O15197 1021 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 GOLGA8HP0CJ92 632 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 KIF11P52732 1056 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 ARHGAP20Q9P2F6 1191 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 LRP5O75197 1615 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 CCNT1O60563 726 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 CAMTA2O94983 1202 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 TECP42680 631 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 PPFIA1Q13136 1202 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 UBE4AQ14139 1066 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 FAM98CQ17RN3 349 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 RRAGAQ7L523 313 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 TADA2BQ86TJ2 420 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 PURBQ96QR8 312 aaKnown RBP11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 OSBPL9Q96SU4 736 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 POLD4Q9HCU8 107 aa11.68□□□□□ -0.54
CX3CL1-201ENST00000006053 ARAP2Q8WZ64 1704 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 BUB1O43683 1085 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 PAFAH1B1P43034 410 aa11.67□□□□□ -0.54
CX3CL1-201ENST00000006053 MAGEA1P43355 309 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms