RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Flvcr1B2RXV4 560 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 AgtP11859 477 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Qrich1Q3UA37 777 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Iqcb1Q8BP00 598 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Mettl5Q8K1A0 209 aa31.09■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Gcom1E9PZ54 550 aa31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Hmgb1P63158 215 aaKnown RBP31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Tmem35bQ3U0Y2 150 aa31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 MyzapQ3UIJ9 466 aa31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Lrrc55Q3UY51 311 aa31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Stxbp3Q60770 592 aa31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Ccdc12Q8R344 166 aaKnown RBP31.08■■■□□ 2.57
Ldb1-208ENSMUST00000185355 Arhgap4B1AUY3 965 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 H2afxP27661 143 aaKnown RBP31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Large2Q5XPT3 690 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 D130040H23RikQ8BII3 405 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ccdc14Q8K2J4 934 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Atxn7Q8R4I1 867 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Dnajc7Q9QYI3 494 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Zkscan5Q9Z1D8 819 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Copb2O55029 905 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Npr3P70180 536 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Adgrg6Q6F3F9 1165 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Trak2Q6P9N8 913 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Cyp4f39Q8BGU0 532 aa31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ddx41Q91VN6 622 aaKnown RBP31.07■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Gm5737A0A140LI11 423 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Tbc1d9bQ5SVR0 1263 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 CtcfQ61164 736 aaKnown RBP31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Hspa4Q61316 841 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Epn1Q80VP1 575 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Kiaa1024Q8K3V7 917 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Tjap1Q9DCD5 539 aa31.06■■■□□ 2.56
Ldb1-208ENSMUST00000185355 ByslO54825 436 aaKnown RBP31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 SarsP26638 512 aaKnown RBP31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ano9P86044 747 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Cyp2e1Q05421 493 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Slc10a5Q5PT54 434 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Trpc6Q61143 930 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Stap2Q8R0L1 411 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Col1a1P11087 1453 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Sept2P42208 361 aaKnown RBP31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Jade2Q6ZQF7 829 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Glrx3Q9CQM9 337 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Tmem192Q9CXT7 266 aa31.05■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Magea10A2AMW4 325 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 NpcdF8VQB8 469 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Cbx1P83917 185 aaKnown RBP31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Pstpip1P97814 415 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Drd5Q8BLD9 478 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Cep95Q8BVV7 827 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Dclk3Q8BWQ5 790 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Psmd2Q8VDM4 908 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Nfatc2ipO09130 412 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Setd4P58467 439 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ncoa7Q6DFV7 943 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Igdcc3Q8BQC3 813 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Lmbrd1Q8K0B2 537 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Spata4Q8K3V1 295 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Fam217aQ9D9W6 419 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Nap1l5Q9JJF0 156 aa31.04■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Man1a2P39098 641 aa31.03■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Vmn1r209Q5NC97 312 aa31.03■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ms4a5Q810P8 197 aa31.03■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ces1Q8VCC2 565 aa31.03■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Etnk2A7MCT6 385 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Csf1rP09581 977 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Eme2Q56A04 373 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Myh14Q6URW6 2000 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Dnph1Q80VJ3 173 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Gmcl1Q920G9 524 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Kremen1Q99N43 473 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Cmtr1Q9DBC3 837 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Bcorl1A2AQH4 1781 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ncf1Q09014 390 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Prom2Q3UUY6 835 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Lrrn2Q6PHP6 730 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Slc5a5Q99PN0 618 aa31.02■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ess2O70279 479 aa31.01■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Zfp781Q0P5U5 243 aa31.01■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Spice1Q8C804 860 aa31.01■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Ttc5Q99LG4 440 aa31.01■■■□□ 2.56
Ldb1-208ENSMUST00000185355 Chp1P61022 195 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Ptger2Q62053 362 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Tubb2aQ7TMM9 445 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Apbb1ipQ8R5A3 670 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Tubb2bQ9CWF2 445 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Ddah1Q9CWS0 285 aa31.01■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Sec14l1A8Y5H7 715 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 EporP14753 507 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Abcb4P21440 1276 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Mcm7Q61881 719 aaKnown RBP31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 CbarpQ66L44 698 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Tmco3Q8BH01 678 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 AacsQ9D2R0 672 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Vav3Q9R0C8 847 aa31■■■□□ 2.55
Ldb1-208ENSMUST00000185355 SynrgQ5SV85 1306 aa30.99■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Gm7168A0AUV4 508 aa30.99■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Psmb7P70195 277 aa30.99■■■□□ 2.55
Ldb1-208ENSMUST00000185355 Tpm4Q6IRU2 248 aa30.99■■■□□ 2.55
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms