RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Fam186bD3Z420 943 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ppef2O35385 757 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Wdhd1P59328 1117 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Sh3gl2Q62420 352 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Baiap3Q80TT2 1134 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Fbxo18Q8K2I9 1042 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 NsmfQ99NF2 532 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Alpk1Q9CXB8 1231 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Psma7Q9Z2U0 248 aa12.57□□□□□ -0.4
Lig1-211ENSMUST00000177588 Slc39a2G3X943 309 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Aco1P28271 889 aaKnown RBP12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ccdc157Q5SPX1 718 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Mettl25Q6NXH8 597 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Asic3Q6X1Y6 530 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Plagl2Q925T4 496 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Git2Q9JLQ2 708 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Trim55G3X8Y1 545 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Stag2O35638 1231 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ap1g2O88512 791 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 MybP06876 636 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Zrsr2Q62377 462 aaKnown RBP12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ppm1eQ80TL0 749 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ttll4Q80UG8 1193 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 AopepQ8BXQ6 817 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Matr3Q8K310 846 aaKnown RBP12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Msantd4Q91YU3 345 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Lonrf3Q9D4H7 753 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 Arl6ip4Q9JM93 229 aa12.56□□□□□ -0.4
Lig1-211ENSMUST00000177588 EvplQ9D952 2035 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Trim30cD3YVI9 513 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Hnrnph3D3Z3N4 346 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Vmn2r71L7N2D8 855 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Serpinb6dQ3UWK8 375 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Lrrc55Q3UY51 311 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 LrmpQ60664 539 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Secisbp2lQ6A098 1086 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ccdc148Q6P5U8 527 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Znf771Q8BJ90 317 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Slc9b1Q8C0X2 565 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Trim9Q8C7M3 817 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Rbm19Q8R3C6 952 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tor1aip1Q921T2 595 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ubxn6Q99PL6 442 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Efhd1Q9D4J1 240 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nxnl2Q9D531 156 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cd2apQ9JLQ0 637 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ubr3Q5U430 1889 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Frmpd4A2AFR3 1320 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Prdm11A2AGX3 565 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ftl1P29391 183 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Dok7Q18PE0 504 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Tax1bp1Q3UKC1 814 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Carmil2Q3V3V9 1296 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nup133Q8R0G9 1155 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Trub2Q91WG3 331 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Slfn1Q9Z0I7 337 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nol4P60954 483 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Skap2Q3UND0 358 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Gm5592Q3V0A6 857 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Myo19Q5SV80 963 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 NntQ61941 1086 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Fbxo41Q6NS60 873 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Spag7Q7TNE3 227 aaKnown RBP12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Epha10Q8BYG9 1007 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Zkscan3Q91VW9 553 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Eps8l2Q99K30 729 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 MycbpQ9EQS3 103 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Nr2e3Q9QXZ7 395 aa12.55□□□□□ -0.4
Lig1-211ENSMUST00000177588 Gm36210A0A1B0GS00 229 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Psd3Q2PFD7 1037 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ddx3xQ62167 662 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Fkbp3Q62446 224 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cep70Q6IQY5 616 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Kctd3Q8BFX3 815 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 LRWD1Q8BUI3 648 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Traf3ip3Q8C0G2 513 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Vcpip1Q8CDG3 1220 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Six6os1Q9CTN5 574 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 1700018B08RikQ9DA83 213 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 FignQ9ERZ6 759 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Kif13bA0A286YCV9 1847 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Col11a2Q64739 1736 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Odf2A3KGV1 830 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Gm1993A6X8I0 212 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 SlxD3Z347 212 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Zfpm1O35615 995 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Atp6v0a2P15920 856 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ssrp1Q08943 708 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Sec31aQ3UPL0 1230 aaKnown RBP12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Krtap5-3Q9D226 196 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cmtr1Q9DBC3 837 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 EhhadhQ9DBM2 718 aa12.54□□□□□ -0.4
Lig1-211ENSMUST00000177588 Bpifb4A2BGH0 617 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Usp53P15975 1069 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Ptpn12P35831 775 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Znf280dQ68FE8 974 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 HyiQ8R1F5 277 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cgref1Q8R1U2 281 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 Cabp7Q91ZM8 215 aa12.53□□□□□ -0.4
Lig1-211ENSMUST00000177588 GzmnQ920S1 248 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms