RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 RabggtaQ9JHK4 567 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Plcb1Q9Z1B3 1216 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 PurbO35295 324 aaKnown RBP17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 RaraP11416 462 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Wdhd1P59328 1117 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Meis3P97368 378 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tm4sf1Q64302 202 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Zbtb39Q6PDK0 712 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Dpp8Q80YA7 892 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Hpcal4Q8BGZ1 191 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Morc2bQ8C5W4 1022 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Zswim4Q8C7B8 1101 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Zbed3Q9D0L1 228 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Krt34Q9D646 392 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tacc2Q9JJG0 1149 aa17.44■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Mxd3Q80US8 206 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 RbsnQ80Y56 783 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Mboat7Q8CHK3 473 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Xrcc4Q924T3 326 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Cmtr1Q9DBC3 837 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Lrrc32G3XA59 663 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ube3aO08759 870 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Kif3cO35066 796 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Sema6bO54951 886 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tcp11Q01755 566 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tmem232Q5K6N0 675 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Mcm7Q61881 719 aaKnown RBP17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ankrd13dQ6PD24 605 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ercc6lQ8BHK9 1240 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Igdcc3Q8BQC3 813 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 WdpcpQ8C456 722 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Znf131Q8K3J5 619 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Grin3bQ91ZU9 1003 aa17.43■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pitpnm2Q6ZPQ6 1335 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Nme9A0A1L1SUL6 329 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Map7d1A2AJI0 846 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Lrrc4bP0C192 709 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Hmgb1P63158 215 aaKnown RBP17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pla2g4eQ50L42 875 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Jakmip3Q5DTN8 844 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pnma5Q5DTT8 618 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Znf280dQ68FE8 974 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Slc9b1Q8C0X2 565 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Epc1Q8C9X6 813 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Sumf1Q8R0F3 372 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 CpzQ8R4V4 654 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Krt79Q8VED5 531 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Glrx3Q9CQM9 337 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 March8Q9DBD2 286 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ipo7Q9EPL8 1038 aaKnown RBP17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Gm45208A0A140LJ36 292 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Magea10A2AMW4 325 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ces1aE9PYP1 563 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ifnar1P33896 590 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ddx3yQ62095 658 aaKnown RBP17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Eif3cQ8R1B4 911 aaKnown RBP17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Dact1Q8R4A3 778 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pcdhb5Q91XZ5 792 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 AatfQ9JKX4 526 aaKnown RBP17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Sertad1Q9JL10 236 aa17.42■□□□□ 0.38
Sdc1-205ENSMUST00000171158 GalcP54818 684 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Vsnl1P62761 191 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Cct6aP80317 531 aaKnown RBP17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Klhdc9Q3USL1 350 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 ItgadQ3V0T4 1168 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Gtf3c5Q8R2T8 520 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Kremen1Q99N43 473 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Slc26a4Q9R155 780 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Cntnap1O54991 1385 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Terf1P70371 421 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tmtc1Q3UV71 942 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Scnn1aQ61180 699 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 GnptabQ69ZN6 1235 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Bbs9Q811G0 885 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Maip1Q8BHE8 291 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Cdk17Q8K0D0 523 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Atp1a1Q8VDN2 1023 aaKnown RBP17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ttll1Q91V51 423 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 AdarQ99MU3 1178 aaKnown RBP17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Eif2ak3Q9Z2B5 1114 aa17.41■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Prl2c2P04095 224 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Vcam1P29533 739 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Zhx1P70121 873 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ttbk2Q3UVR3 1243 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Haus6Q6NV99 933 aaKnown RBP17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ccdc189Q6NZQ0 333 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Papd7Q6PB75 542 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Q8C1R3 189 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tesk2Q8VCT9 570 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 FignQ9ERZ6 759 aa17.4■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Exoc3l2D3YUP5 789 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Abcb4P21440 1276 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Pstpip1P97814 415 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ccdc42Q5SV66 316 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Mettl5Q8K1A0 209 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Ifih1Q8R5F7 1025 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Eef1gQ9D8N0 437 aaKnown RBP17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Tmem191cQ9JJB1 302 aa17.39■□□□□ 0.38
Sdc1-205ENSMUST00000171158 Col4a5Q63ZW6 1691 aa17.39■□□□□ 0.37
Sdc1-205ENSMUST00000171158 Gm7168A0AUV4 508 aa17.39■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms