RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Q91WD4 421 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 MymkQ9D1N4 221 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Siglec1Q62230 1695 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gm36210A0A1B0GS00 229 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 DgkiD3YWQ0 1071 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Krt78E9Q0F0 1068 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 RcvrnP34057 202 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Zfp781Q0P5U5 243 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Plbd2Q3TCN2 594 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Hdhd2Q3UGR5 259 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Slc38a10Q5I012 1090 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kcna6Q61923 529 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Olfr118Q7TRJ6 321 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kctd3Q8BFX3 815 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Rnf41Q8BH75 317 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Slc13a4Q8BZ82 625 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 CutaQ9CQ89 177 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Klra17Q9JMA4 273 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 PfasQ5SUR0 1337 aa12.69□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tex13c2A0A0G2JGA3 530 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Zfp853A0A1D5RM95 733 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pdzrn4E9PUZ9 1014 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Usp35M0QWN7 1009 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Rps6ka3P18654 740 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Actn4P57780 912 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ccdc42Q5SV66 316 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mcm7Q61881 719 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Znf280dQ68FE8 974 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gpbp1Q6NXH3 473 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Zbed4Q80WQ9 1168 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kirrel3Q8BR86 778 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Dnajc28Q8VCE1 385 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Eif4a3Q91VC3 411 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Acot3Q9QYR7 432 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gpaa1Q9WTK3 621 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ubr2Q6WKZ8 1755 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Fam186bD3Z420 943 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Stag2O35638 1231 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pfkfb2P70265 519 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Rnpc3Q3UZ01 514 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Arhgap44Q5SSM3 814 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Znf496Q5SXI5 585 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Cep70Q6IQY5 616 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Exoc3Q6KAR6 755 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Aggf1Q7TN31 711 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Naa25Q8BWZ3 972 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Znf445Q8R2V3 986 aa12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mrpl12Q9DB15 201 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gm17615E9Q9P2 165 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 PurbO35295 324 aaKnown RBP12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mapkapk5O54992 473 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nub1P54729 614 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Cdcp1Q5U462 833 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Atf3Q60765 181 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Gbp4Q61107 620 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ccdc122Q8BVN0 290 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Fermt2Q8CIB5 680 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ubxn1Q922Y1 297 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Spata1Q9D5R4 444 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ttc13A0A1L1SSC7 844 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Serpina16D3Z660 418 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 DSCC1Q14AI0 399 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Shc3Q61120 474 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Slc9a1Q61165 820 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Dcaf5Q80T85 946 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tspan18Q80WR1 248 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 RragaQ80X95 313 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Sgsm3Q8VCZ6 750 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Abcf2Q99LE6 628 aaKnown RBP12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ddx47Q9CWX9 455 aaKnown RBP12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Stx17Q9D0I4 301 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Calml3Q9D6P8 149 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Akr1e2Q9DCT1 301 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Foxo4Q9WVH3 505 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ppef2O35385 757 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Arhgap6O54834 987 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tmod1P49813 359 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Ddr1Q03146 911 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Asic1Q6NXK8 526 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kdm1aQ6ZQ88 853 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Traf3ip3Q8C0G2 513 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Dhx58Q99J87 678 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Golph3Q9CRA5 298 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Six6os1Q9CTN5 574 aa12.67□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Tnks1bp1P58871 1720 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Samd15F6XZJ7 620 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nlrp2Q4PLS0 1046 aaKnown RBP12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 QarsQ8BML9 775 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Asic2Q925H0 512 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Vwa5aQ99KC8 793 aaKnown RBP12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 FocadA2AKG8 1798 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Pde4dQ01063 747 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Phactr4Q501J7 694 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kctd16Q5DTY9 427 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Mybpc2Q5XKE0 1136 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Krt74Q6IFZ9 495 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Kif1bpQ6ZPU9 617 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Nme8Q715T0 586 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 Lgi2Q8K4Z0 550 aa12.66□□□□□ -0.38
Prpf40b-208ENSMUST00000136980 MlphQ91V27 590 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms